Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02756 ATGTCTGCTGCTGTGTGCGGAAGCAAGAGATCTTTCTTCGAAGAGCTTCCTCCGTCACCGCCGCTCTCCAAGAGGCTCCGTTGTTCCTCTTCGCCGATTCGCTTCCCTCCTCTCTCTCTCATCGACCAGCTTCGCCCGCTCTTTCCCCACATGGACGACCTGGTTCTTGAGAGGGCACTTCAAGAATGTGGAAATGATATAGATGCTGCAATCAAGAGGTTGAACGAGCTTTGCTTGGGAAATGCAGATGGAAATGGAAATTCCGAAGGATCGGATGTTGTTAATTTGGATGCAGGTAAATTGGAAGACAATGGAAATGCTTCTGTTCCTGAGGACCAGCCTACTTTGAACAACCACCTTCCTGCAGATGGAGCAGAATGGATTGACTTTTTTGTTAGGGAAATGATGGTTGCTACTAGTGTTGATGATGCTAGAGCCCGTGCTGGTAGAATGCTAGAAGTTCTAGAGAAATCAATCAGTGAAAGAGCAAGGGCTGAGGCAACTGATGCACTTCTAAAGGAAAATTTGATGCTGAAAGAGCAAATCGAAGCATTGATTAAAGAGAAAAATTCTTTCAAAAATGCTTTTAAAATCCAGCATGAACGATCTGCTGATTACGAGGTTAAGAACCAAGAGTTGCAGCATTTAAAGCAATTGGTGTCTCAATACCAGGAGCAGATTAGAACTCTCGAGGTGAATAACTATGCTTTGGCAATGCATTTGAAGCAGGCTCAACAGAGCAACCCCTTTACTGGGCACTTCCCACCTGATGTCTTCTAA 780 0.45 MSAAVCGSKRSFFEELPPSPPLSKRLRCSSSPIRFPPLSLIDQLRPLFPHMDDLVLERALQECGNDIDAAIKRLNELCLGNADGNGNSEGSDVVNLDAGKLEDNGNASVPEDQPTLNNHLPADGAEWIDFFVREMMVATSVDDARARAGRMLEVLEKSISERARAEATDALLKENLMLKEQIEALIKEKNSFKNAFKIQHERSADYEVKNQELQHLKQLVSQYQEQIRTLEVNNYALAMHLKQAQQSNPFTGHFPPDVF 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02756 259 SUPERFAMILY UBA-like 40 81 IPR009060 GO:0005515
Viun10g02756 259 CDD CUE 39 74 - -
Viun10g02756 259 Gene3D - 39 79 - -
Viun10g02756 259 PANTHER UBIQUITIN SYSTEM COMPONENT CUE PROTEIN 1 259 - -
Viun10g02756 259 ProSiteProfiles CUE domain profile. 36 79 IPR003892 GO:0043130
Viun10g02756 259 Coils Coil 168 195 - -
Viun10g02756 259 Pfam CUE domain 40 76 IPR003892 GO:0043130
Viun10g02756 259 Coils Coil 206 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02756 Viun-Chr10 40565817 40570262 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02756 - - gmx:100813137 438.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun10g02756 10 40565817 40570262 Viun10g02756 10 40565817 40570262 ECH
Viun5g04056 5 48083213 48085763 Viun10g02756 10 40565817 40570262 PCT