Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02620 ATGCTATCGCCGTTTTCGCCCATGCCGGAAATCCCCGTCGATTTCCGCGCGCCGCCGCCATCTCCGGTGGCATCCGGCCGGAGATCCACCGTCACCAACGACGACGTTTTGACCGAGTTTCTAGAGGCCTCGCTCCGCGTCCCCGATCTGGTCCTGCCGGACAAGATCTTCCCCAAGCAGAACCACCTCGACGCGCCTCCCGAGGTCGACTTCGTGTCGCTCTGCTTCCACCGCGACGACGCTCTCCGCGACGTCGTTTCCGACTCCCTCGCCAGGATCGGATGCTTCCAGCTGCTAAACCACGGGATTCCGTCGCAGCTGGTGGACTCCGCCGCCGCGGACGCCGCCAGAGTGTTCCAGGTGCCGCACGCTAAACGTGCAGCAGCGACTAGGTCGCCGGAGAAGCCGTGGGGGTTCGAGGAGTATCACGCCGGAGAGGAGGAAGAAGAAGGTAGTGAGGAATTCGTGTGGTGCAATGAGGAGGAATTGAAGTCGAAAATGGAGGGAATTTGGCCCATTGGATATCCAAATTTCAGTGAAAAGATGGAAAAGCTTATGTCACGCATAGAGATGGTGGGTATGAAAATGTTGGGTGTGATACTGAAAAAGAAGAGTGCAGAATTTGAGGGTGGGAATGAGAAAGGGAATGTTTGTTGCATTTATAAACATGGTGGTGATAATACTAAGGATGCATGGGCTAATTCCTTGAAATACGATGTGATTAGAATGCTGATCAGGGGAACCGATTACTCTCATTCATTGTGCTTCCATCTTTGCAATGGCTCTTCACAGTTTCATGTTTACTCCAAGAAAAGTTGGCTCTCTTTCTTCCCTCACCCAGGTGCCCTTATAGTAACAGCAGGAGATCAAATTCAGATGTTGAGTGGAGGAGAGTACAAAAGTGTGATTGGAAGAGCAATCTTGAAAGCAGAGAAAGAAGAGAAGATTTCAATGGCTTTCCTGTGTTGTCCACAAAAGAAGAAGAAGAAGAAGAATTTTGGAAGCAGTGAGAGTAGAAGTGTTTCACTTTCCCAGCAAGCCATATTGGCTTTAATTCTGCCCCTTGTGTACAATGTCATCATTTTTGTGTTCAAAAAATTCAATTCATGA 1110 0.4991 MLSPFSPMPEIPVDFRAPPPSPVASGRRSTVTNDDVLTEFLEASLRVPDLVLPDKIFPKQNHLDAPPEVDFVSLCFHRDDALRDVVSDSLARIGCFQLLNHGIPSQLVDSAAADAARVFQVPHAKRAAATRSPEKPWGFEEYHAGEEEEEGSEEFVWCNEEELKSKMEGIWPIGYPNFSEKMEKLMSRIEMVGMKMLGVILKKKSAEFEGGNEKGNVCCIYKHGGDNTKDAWANSLKYDVIRMLIRGTDYSHSLCFHLCNGSSQFHVYSKKSWLSFFPHPGALIVTAGDQIQMLSGGEYKSVIGRAILKAEKEEKISMAFLCCPQKKKKKKNFGSSESRSVSLSQQAILALILPLVYNVIIFVFKKFNS 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02620 369 Pfam 2OG-Fe(II) oxygenase superfamily 248 324 IPR044861 -
Viun10g02620 369 Gene3D - 49 340 IPR027443 -
Viun10g02620 369 Pfam non-haem dioxygenase in morphine synthesis N-terminal 78 157 IPR026992 -
Viun10g02620 369 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN 7 364 - -
Viun10g02620 369 MobiDBLite consensus disorder prediction 1 30 - -
Viun10g02620 369 SUPERFAMILY Clavaminate synthase-like 56 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02620 Viun-Chr10 39779914 39781910 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02620 - - gmx:100786234 558.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun10g02620 10 39779914 39781910 Viun10g02620 10 39779914 39781910 ECH
Viun5g03860 5 47053351 47055764 Viun10g02620 10 39779914 39781910 PCT