Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02530 ATGGCTTCAGTTGGTGCACTCAAATTCTTGTTGTTCCAAGTTCTATTGCTCTGCAACTTTCTACCTTCTTCTCAAGGTAACAAGCAGTGGCATGAAAAAAGTTACCCTTTTATCAGAAATGCAAGTTCATTCTCATCATCATCAATTTCAACCACCACCTCCAAAAATGTGTATGATTACATAATAGTGGGAGGTGGCACTGCAGGGTGTCCTCTGGCTGCAACCCTATCTCAGAAATTCAGTGTTCTTATGCTTGAAAGAGGGGGTGTTCCCTTCACCAACCCTAATGTTTCATTTCTTGAGAACTTCCACATGACCTTAGCAGATGTTTCACCAACTTCAGCTTCTCAATTCTTCATTTCAAAGGATGGAGTCTACAATTCTAGGGCCAGGATCTTAGGAGGTGGAAGCTCCATCAATGCTGGTTTCTACACCAGAGCAAATCCAAGGTTTATAAAGAAGGTTGGATGGGATATCAAGCTGGTGAATCGGTCATATCCATGGGTTGAAAACCAAATTGTTCACCGTCCAAAGTTTTCACCTTATCAAAGAGCAGTGAGGGATAGTCTTCTAGACGCTGGTGTGTCACCTTTCAATGGCTTCACCTATGATCATCTCTATGGAACAAAAGTTGGTGGAACCATTTTTGACACTTATGGCCGCCGCCACACAGCTGCTGAATTGCTTGCTTCAGGGAACCATGAAAAACTCAGTGTTTTGGTCTATGCCACTGTCCAAAAGATTGTGTTTGATACAAAAGGAAAGAAACCAAAAGCTGTGGGGGTTATTTTCCAAGATGAGAATGGGAAACAGCATGAAGCTATTCTGGCAAATGATAGGCATAGTGAAGTGATAATGTCTTCTGGGGCAATTGGGACTCCTCAACTGCTGATGCTTAGTGGAATTGGACCAAAAGAAGAACTCCAGAAGTTGAACATCCCAGTGATCTTTGACAACCACTTTGTTGGAAAAGGAATGGTAGACAATCCCATGAACACAATGTTTGTTCCTTCTAAAAGACAAGTTCATCAGTCACTGATAGAAACTGTTGGAATCACCAAGATGGGCGTGTACATTGAGGCTAGCAGTGGCTTCAGTCAGTCTAATGATAGCATTCATTGCCACCATGGTATCATGTCAGCAGAGATTGGGCAGCTTTCTACAATCCCTCCTAAGCAAAGATCAGCAGAAGCTATCCAAGAATTTATGAACAACAAGAAAGACCTACCGATTGAAGCATTTAAGGGAGGTTTTATTCTGTCAAAAGTTGCAAATCCTTGGTCAGTTGGTGAGCTGAAGCTGATCAACACCAATGCTAATGACAATCCATCTGTTGCCTTCAACTATTTCAGTCATCCATATGATCTTCAGCGCTGCGTTAAGGGGATCCGTTTGGCCATAAAGGTTGTCCAGTCAAAACATTTCACAAACTACACTTTGTGTGACAGAAAAACAGCAGAGGAACTGCTCAACCTCACTGTGAAGGCTAATGTCAACTTCATACCCAAGCATGCCACAGACACAAAGTCACTGAAGCAGTTCTGCAAAGACACTGTGATCACAATTTGGCACTACCATGGAGGGTGCCATGTGGGGAAGGTAGTCAACCGTGATTACATGGTTCTTGGTGTTGACAGACTCCGTGTGGTAGATGGCTCAACATTTGATGAATCACCGGGAACAAATCCTCAAGCCACTGTTATGATGATGGGCAGGTACATGGGACTGAAGATTTTGAGAGGCAGGTTGGGGAAATTGGCAGGTATATAA 1770 0.4305 MASVGALKFLLFQVLLLCNFLPSSQGNKQWHEKSYPFIRNASSFSSSSISTTTSKNVYDYIIVGGGTAGCPLAATLSQKFSVLMLERGGVPFTNPNVSFLENFHMTLADVSPTSASQFFISKDGVYNSRARILGGGSSINAGFYTRANPRFIKKVGWDIKLVNRSYPWVENQIVHRPKFSPYQRAVRDSLLDAGVSPFNGFTYDHLYGTKVGGTIFDTYGRRHTAAELLASGNHEKLSVLVYATVQKIVFDTKGKKPKAVGVIFQDENGKQHEAILANDRHSEVIMSSGAIGTPQLLMLSGIGPKEELQKLNIPVIFDNHFVGKGMVDNPMNTMFVPSKRQVHQSLIETVGITKMGVYIEASSGFSQSNDSIHCHHGIMSAEIGQLSTIPPKQRSAEAIQEFMNNKKDLPIEAFKGGFILSKVANPWSVGELKLINTNANDNPSVAFNYFSHPYDLQRCVKGIRLAIKVVQSKHFTNYTLCDRKTAEELLNLTVKANVNFIPKHATDTKSLKQFCKDTVITIWHYHGGCHVGKVVNRDYMVLGVDRLRVVDGSTFDESPGTNPQATVMMMGRYMGLKILRGRLGKLAGI 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02530 589 SUPERFAMILY FAD/NAD(P)-binding domain 52 580 IPR036188 -
Viun10g02530 589 PIRSF Alcohol_oxidase 38 587 IPR012132 GO:0050660
Viun10g02530 589 ProSitePatterns GMC oxidoreductases signature 2. 289 303 IPR000172 GO:0016614|GO:0050660
Viun10g02530 589 Gene3D - 175 521 - -
Viun10g02530 589 Gene3D - 58 571 IPR036188 -
Viun10g02530 589 Pfam GMC oxidoreductase 218 330 IPR000172 GO:0016614|GO:0050660
Viun10g02530 589 Pfam GMC oxidoreductase 58 151 IPR000172 GO:0016614|GO:0050660
Viun10g02530 589 Pfam GMC oxidoreductase 426 572 IPR007867 GO:0016614
Viun10g02530 589 SUPERFAMILY FAD-linked reductases, C-terminal domain 326 528 - -
Viun10g02530 589 PANTHER OSJNBA0019K04.7 PROTEIN 20 583 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02530 Viun-Chr10 39190182 39196300 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g02530 58 582 Miscellaneous Gene Families AT5G51950 53.296 0.0 549
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02530 K15403 - gmx:100788704 1021.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g03789 5 46564684 46569743 Viun10g02530 10 39190182 39196300 PCT