Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g01936 ATGCCTTTGAATTCGATTCTGTGGTGTCAACTCAACTCGATTCTTCTCAGTGTGTTGTTTCTTTTTTGTTGTTCTCTTGACCTGAGCTCCGCAAACGATGAATTGGTTGGAGTCACTGATGATGTCTTCACTGTTTCCAGCTTCAGCTACCCTCAGACTACTCTCGGACCCTTTGATATGCGCTACATCAGAGTTGACATACCACCATGGTTTTCTGCAGTGTCCTTAGCATTGAACTCGGATGTAGACCTTGATGTTTCAAGAGTTGAAAGGATTCCAAAAAGCTCACTGCCCATCATATGCTTTAGAGATGGCAGCCCTCCTCTGCCAGATGCTTTAAACATATCTCTGAAGGATTCAGCTGTCACAGGAATAAATGGTCTTGACAACGAGCAGTGTTTTCCTATGGAGAAAAACATCACTATGAAATTGACAAACGAACAGATATCTCCAGGTGCATGGTATATTGGTCTTTTCAACGGAATTGGAGCTGCAAGAACACAATCGAGGATGATTATCCGTGGCTCAGCATACTCATTCAGTGCCAATATAAGCGTGGAAGCATGCTCAAATTCAATGATGAAAGGGGAGCTATGTAACAGTACAGTCTATCCACTTTCATGCACAGTATCTGATGCCTATAATTCCGTGAAGGCTACAGTGACGAAGCCACTGATGGAAAATGTGATGACCTGTAAAAGTAACCTAGATACGTTTTGTGCACACGAAGGTGTACCAGAACTTTACTCTCTGGATGTAACTAACATGGTAGAAGAATTGATCATTAAGGTAGAAAATGTCAAATTCAATACTACAACTTCAAATAACACTTCTAGTGCAAATGATGTCGGATTAATGGGTTTTGTTCGCCATGGTGCAATTCCTTCAGAAACTTTGCATGATTATTCCGGTGATTTGAATAAGGCCCCTTTGATTATCCGTTATCCACTGATTGGACGTTTGTACATTAGTATAGTACCAGTTGATGTTTCAAAAAAGTCTGTAGGGACTTTGGATGGCAATTTAAAAGTTTGTTACTCCATGGAATCACAAGTACTTCAGTGTGCACTTGGAAAAGCGGGACCAAATTGCACAATGGACAGCTACACACTTCAGACAGTTCTAAGGAGAGGAGGTCCAATTCCCTTTGAATCATACTTTTTACCTGTGGTTGATGGTGAAGGAGCATCTTCTGCCAATTTTCCTCTTGAGCCATTTTTGAATAAGTCATCAAATGAAGGAAGAACTGATGACATTTGGACTTATTTTACTTTGGACATTCCCCATGGTGCAGCTGGACGGAACATTCACATACGATTATCGGCAGATGTCAAGATCAATTATGAAGTGTATGCTAGATTTGGTGGATTGCCTTCTCTTGATAACTGGGACTATTATTATGCTAACAGGACAAGGAAGAGTGACCAGTCCATGTTTTTCATGCTATATGATTCAAGTGACGACAAAATTGATTTTTACATCATTTATGCTAGAGAAGGAACTTGGGGTTTAGGTCTAAGGCATCTTTATACCAGCAGTGATTCTACGAAAGCGCAAACAGTCATGTCTGTTTCACTTGAAGGATGCCCAAAACAGTGTTCCTTTCATGGAGACTGTAAATATTCTTTTGATGCCAGTGGATTGACATCGTTCAGCTTCTGCTCCTGTGATCGAAACCATGGTGGCTTTGACTGTAGCGTTGAAATTGTATCACACAAAGGGCATATACTGCAATCCATTTTTCTCATTGGATCAAACGCTGCAGCCATACTTCCTGCCTATTGGTCCCTTAGGGAAAAGGCATTTGCAGAATGGGTTTTATTCACATCCAGTGGAATCGCTAGTGGGCTATATCACGCATGTGATGTTGGCACCTGGTGTGCATTGAACTTTAATGTTTTACAGTTCATGGATTTCTGGCTCTCTTTCATGGCTGTGGTTAGCACTTTTGTATACCTAGCAACCATTGATGAAGTATATAAGAGGGCAATCCACACAACTGTTGCTATCCTCACTGCCCTCTTGGCTGCAACTAAGGCAACTAGGTCTTCCAATATTGTTCTTGTCATTGTGATTGGAGCTCTTGGTCTTCTTATTGCATGGTTGATAGAAATCTCAAAAAGATATAGGTCCCTCTCCTTTTCATCTGGATTATCACTAAGTTTCCTTCAAAGCATGCAAACTATGAAGCAATGGTTCTGTAATTTGGTGAAGACACTCCTGAGACGGTTTCGCTGGGGCTTTATGGTGGTTGGTTTCATTGCATTGGCCATGGCAGGATTAAGCTGGACGCTTGAAACCAGTGCAACCTACTGGTTTTGGCACAGCTTTTGGCATGTTACAATATACACATCTTCTTTCTTCTTCCTTTGCTCAAAAGCAAACATTGATGATAATGAAATTTCACCACCTTCAAGTGGAAATTATGCACTGACTCGTCAGGATTCATTTTCAAGAGGTATTTAG 2466 0.4104 MPLNSILWCQLNSILLSVLFLFCCSLDLSSANDELVGVTDDVFTVSSFSYPQTTLGPFDMRYIRVDIPPWFSAVSLALNSDVDLDVSRVERIPKSSLPIICFRDGSPPLPDALNISLKDSAVTGINGLDNEQCFPMEKNITMKLTNEQISPGAWYIGLFNGIGAARTQSRMIIRGSAYSFSANISVEACSNSMMKGELCNSTVYPLSCTVSDAYNSVKATVTKPLMENVMTCKSNLDTFCAHEGVPELYSLDVTNMVEELIIKVENVKFNTTTSNNTSSANDVGLMGFVRHGAIPSETLHDYSGDLNKAPLIIRYPLIGRLYISIVPVDVSKKSVGTLDGNLKVCYSMESQVLQCALGKAGPNCTMDSYTLQTVLRRGGPIPFESYFLPVVDGEGASSANFPLEPFLNKSSNEGRTDDIWTYFTLDIPHGAAGRNIHIRLSADVKINYEVYARFGGLPSLDNWDYYYANRTRKSDQSMFFMLYDSSDDKIDFYIIYAREGTWGLGLRHLYTSSDSTKAQTVMSVSLEGCPKQCSFHGDCKYSFDASGLTSFSFCSCDRNHGGFDCSVEIVSHKGHILQSIFLIGSNAAAILPAYWSLREKAFAEWVLFTSSGIASGLYHACDVGTWCALNFNVLQFMDFWLSFMAVVSTFVYLATIDEVYKRAIHTTVAILTALLAATKATRSSNIVLVIVIGALGLLIAWLIEISKRYRSLSFSSGLSLSFLQSMQTMKQWFCNLVKTLLRRFRWGFMVVGFIALAMAGLSWTLETSATYWFWHSFWHVTIYTSSFFFLCSKANIDDNEISPPSSGNYALTRQDSFSRGI 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g01936 821 ProSitePatterns EGF-like domain signature 1. 554 565 IPR000742 -
Viun10g01936 821 PANTHER FIVE-SPAN TRANSMEMBRANE PROTEIN M83 9 819 IPR021910 GO:0016020
Viun10g01936 821 Pfam Protein of unknown function (DUF3522) 575 780 IPR021910 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g01936 Viun-Chr10 34048995 34056311 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g01936 - - gmx:100777848 1397.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g00861 5 5413073 5420575 Viun10g01936 10 34048995 34056311 PCT