Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g01917 ATGGTTTCAGTTGGAGCTGTTCATAGTGCGGTCTATGTGCTCCTGCTTTCAGTCACTCTGGTTTTGGGTGGGGACATAGTTCACCATGATGATGTTGCCCCCATAAGGCCTGGTTGTGACAACAACTTTGTTTTGGTAAAAGTCCCCGCTTGGATTGATGGTGTGGAAAAAAATGAGTATGTTGGTGTTGGTGCGAGGTTTGGCCCTACGTTGGAATCAAAAGAAAAACGTGCCAATCTTACCAGAGTTGTCATGGCTGATCCTCCTGATTGTTGTACAAAGCCTAAGAATAAACTCACCAGCGAGATAATTTTGGTGCACCGAGGAAAATGCAGTTTCACTACAAAGGCGAATATTGCTGATGAAGCTGGTGCTTCAGCCATCCTCATTATAAACTACCGTACAGAACTTTTCAAGATGGTTTGTGAAGAAAATGAAACTGATGTTGATATAGGAATACCTGCTGTCATGCTTCCCCAAGATGCTGGATTGACTTTGGAAAGGCATATTAAAAATAACTCCAATGTGTCCATACAGTTATACTCTCCATTGCGCCCATTGGTTGATGTTGCGGAAGTGTTTTTGTGGCTTATGGCTGTTGGTACCATTTTATGTGCTTCATATTGGTCTGCCTGGAGTGCTAGAGAAGCAGCTATTGAGCAAGAGAAGCTTTTAAAGGATGCTTCAGATGACTATACTAATACAGAAAATGTTGGTTCCACTGGTTATGTGGAAATTAGTACCATAGCAGCAATCTTATTCGTCGTGATTGCTTCATGTTTCTTGGTTATGCTGTATAAATTAATGTCATTCTGGTTTGTTGAAGTTCTGGTGGTTCTGTTTTGCATTGGCGGGGTAGAGGGACTGCAAACTTGTTTGGTGGCCCTATTATCATGTTTTAGATGGTTTCGCCAACCTGCCCAGACATTTGTGAAGATACCCTTCTTTGGAGCTATCTCATATCTGACACTTGCTGTTACTCCATTCTGCATAGTGTTTGCTGTGGTTTGGGCGGTTTGTCGCCATGATTCATGGGCTTGGATCGGTCAGGATATCCTTGGTATCACATTGATAATTACAGTTCTTCAGATTGTTCGCATACCAAATCTAAAGGTTGGGACTGTTCTTCTCAGTTGTGCATTCCTATATGACATCTTCTGGGTGTTTGTCTCTAAATGGTGGTTCCATGAGAGTGTGATGATAGTGGTAGCTCGTGGTGATAAGAGTGGAGAAGATGGCATTCCCATGCTTCTCAAGATACCTCGTCTATTTGACCCTTGGGGTGGTTACAGTATCATTGGATTTGGGGACATAATCTTACCAGGACTTATAGTGGCATTTTCACTAAGGTATGATTGGTTGGCAAAGACGAACCTTCGTGCTGGATACTTCTTGTGGGCAATGACTGCTTATGGTTTAGGTCTCCTCATCACATATGTGGCTTTGAACTTGATGGATGGGCATGGTCAGCCAGCTTTGCTTTATATAGTTCCATTTACACTTGGCACCTTTTTGTCATTGGGAAAAAAGAGAGGCGAACTCAAGATTTTATGGACAAGAGGGGAACCAGAAAGGCCTTGCTGTCATATCCAAGAGGATAATCAATCAACTAACAGCCACCATTGA 1626 0.4262 MVSVGAVHSAVYVLLLSVTLVLGGDIVHHDDVAPIRPGCDNNFVLVKVPAWIDGVEKNEYVGVGARFGPTLESKEKRANLTRVVMADPPDCCTKPKNKLTSEIILVHRGKCSFTTKANIADEAGASAILIINYRTELFKMVCEENETDVDIGIPAVMLPQDAGLTLERHIKNNSNVSIQLYSPLRPLVDVAEVFLWLMAVGTILCASYWSAWSAREAAIEQEKLLKDASDDYTNTENVGSTGYVEISTIAAILFVVIASCFLVMLYKLMSFWFVEVLVVLFCIGGVEGLQTCLVALLSCFRWFRQPAQTFVKIPFFGAISYLTLAVTPFCIVFAVVWAVCRHDSWAWIGQDILGITLIITVLQIVRIPNLKVGTVLLSCAFLYDIFWVFVSKWWFHESVMIVVARGDKSGEDGIPMLLKIPRLFDPWGGYSIIGFGDIILPGLIVAFSLRYDWLAKTNLRAGYFLWAMTAYGLGLLITYVALNLMDGHGQPALLYIVPFTLGTFLSLGKKRGELKILWTRGEPERPCCHIQEDNQSTNSHH 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g01917 541 PANTHER SIGNAL PEPTIDE PEPTIDASE 68 532 IPR007369 GO:0004190|GO:0016020
Viun10g01917 541 Pfam Signal peptide peptidase 243 522 IPR007369 GO:0004190|GO:0016020
Viun10g01917 541 SUPERFAMILY PA domain 98 136 IPR046450 -
Viun10g01917 541 Pfam PA domain 89 166 IPR003137 -
Viun10g01917 541 Gene3D - 41 183 - -
Viun10g01917 541 SMART psh_8 242 511 IPR006639 GO:0004190|GO:0016020
Viun10g01917 541 FunFam Signal peptide peptidase-like 3 45 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g01917 Viun-Chr10 33869660 33878616 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g01917 K09597 - gmx:100795197 1023.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun10g01917 10 33869660 33878616 Viun10g01917 10 33869660 33878616 ECH
Viun5g00893 5 5593278 5600084 Viun10g01917 10 33869660 33878616 PCT