Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g01667 ATGTTGAAGAACCATTGTAGTTGCAGCATGTCGATCACAGAACCCACTTCAGTGTTTTTCCGCTCCCTTGCCAGAACTTGCAGCAAGAGAAAAGATGCTAAGAATACATACTGGAAGCCTCCACAAGCATCTGCGGGAAATGATTTTCACTTCCCAATTAGCAGTTCAGTGGTTAAAAATAGGACATCAATGGAGGGCATTAGGAGTCTGCGATTGATAACAGCAGTTAAAACTCCTTATCTACCTAACGGCCAATTTGATCTTGATTCTTATGATAACTTGGTGGATATGCAGATTGCAAAAGGCATTGAAGGTATTCTTGTTGCAGGCTCAACTGGTGAAGGCCAACTAATGACCTGGAGTGAACAAATAATGCTTATTGCACACACAGTTAACTGTTTCGGTGACAAAGTTAAGGTTGTTGGTAATGCTGGAAGCAACTGCACATCAGAGGCAATTAAGGCCACTGAGAGAGGTTTTGCTGTTGGAATGAATGCTGCACTTCATATAAACCCTTACTATGGCAAAACCTCTTTGGATGGTTTGGTTGCTCACTATAACAGTGTACTTTCCATAGGCCCCATCATTGTATATAACATACCTACAAGAACTAATCAAGATATTCCTCCCAGTGTAGTTCAAACCTTGGCCCAAAGTCCTAATTTGGTTGGTGTGAAGGAGTGTGTGGGAACTGAGAGGATCAAACAGTATACAGATGAAGGGATTGTTGTATGGACAGGAATTGATAAAATGAGCCATGATGCTAGATGGGATTTTGGAGCTGTTGGAGTTCAATCTGTTGCTAGCAACCTGGTTCCTGGTTTGATGAGAAAACTCATGTTTGAAAACAAGGATGTTACACTGAATTCAAAGCTGATTCCTCTGTTTGATTGGCTTTCTCAAGAGCCTGTCCCTATTGCTTTGAACACTGCTCTTGCTCAACTTGGGGTCATCAAACCAGTTTTCAGGCTACCCCATGTTCCCTTGCCTGTGGATAAAAGGATAGAGTTTATCAATTTGGTGAAGCAAATGGGTCGAGAACATTTTGTTGGAGAAAAAGATGCTCAAGTTCTTGATGATGATGACTTTATCATAGTTGGTAGATATTGA 1110 0.4126 MLKNHCSCSMSITEPTSVFFRSLARTCSKRKDAKNTYWKPPQASAGNDFHFPISSSVVKNRTSMEGIRSLRLITAVKTPYLPNGQFDLDSYDNLVDMQIAKGIEGILVAGSTGEGQLMTWSEQIMLIAHTVNCFGDKVKVVGNAGSNCTSEAIKATERGFAVGMNAALHINPYYGKTSLDGLVAHYNSVLSIGPIIVYNIPTRTNQDIPPSVVQTLAQSPNLVGVKECVGTERIKQYTDEGIVVWTGIDKMSHDARWDFGAVGVQSVASNLVPGLMRKLMFENKDVTLNSKLIPLFDWLSQEPVPIALNTALAQLGVIKPVFRLPHVPLPVDKRIEFINLVKQMGREHFVGEKDAQVLDDDDFIIVGRY 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g01667 369 ProSitePatterns Dihydrodipicolinate synthase signature 1. 105 122 IPR020624 GO:0016829
Viun10g01667 369 SUPERFAMILY Aldolase 72 344 - -
Viun10g01667 369 CDD DHDPS 71 341 IPR005263 GO:0008840|GO:0009089
Viun10g01667 369 Pfam Dihydrodipicolinate synthetase family 70 343 IPR002220 GO:0016829
Viun10g01667 369 PRINTS Dihydrodipicolinate synthase signature 193 210 IPR002220 GO:0016829
Viun10g01667 369 PRINTS Dihydrodipicolinate synthase signature 170 186 IPR002220 GO:0016829
Viun10g01667 369 PRINTS Dihydrodipicolinate synthase signature 102 123 IPR002220 GO:0016829
Viun10g01667 369 PRINTS Dihydrodipicolinate synthase signature 138 156 IPR002220 GO:0016829
Viun10g01667 369 ProSitePatterns Dihydrodipicolinate synthase signature 2. 198 228 IPR020625 GO:0016829
Viun10g01667 369 SMART DHDPS_2 69 345 IPR002220 GO:0016829
Viun10g01667 369 Gene3D Aldolase class I 64 369 IPR013785 -
Viun10g01667 369 PANTHER DIHYDRODIPICOLINATE SYNTHASE 56 354 IPR002220 GO:0016829
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g01667 Viun-Chr10 31588988 31591296 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g01667 K01714 - gmx:100806626 609.372
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g01064 5 7369998 7373600 Viun10g01667 10 31588988 31591296 PCT