Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g01432 ATGTGCACTGGTGCTGAATCTCGAGGAAATATAAATGGTGAGGCTGTGATTCCAAAGGTGGGAGGAGACTATGAGGGGAATAGAATGAGAACCATAGAAGATGGAGAAAGAGAAAGAGGTTGTTGCAACTGTGGCACATTCATTCAAGGTCTTCTTCAACGTCTTCATCACCTTCTCACTGCGCTTAATCTTTCTATTTCTGCATCTGAGTTGAAAGAAGAGTTGCAATCTCTTGCAAAGGTTGCATGTCCTATAATAATGACTAGTCTGATGATGTACTCTCGATCTGCTGTGTCCATGTTGTTCTTGGGTCGGCAAGGGAAAGTAGAACTTGCAGGAGGGTCACTAGCACTTGGATTTGCCAACATAACTGCGAATTCAGTTCTCAAAGGCCTCACAATGGGAATGGACCCAATTTGTTGCCAAGCTTTTGGAGCAAAGAGATGGTCAGTTCTCAACCAAACCTTTTTCAGAACTATATGTCTCCTCCTACTTGTTGCCATACCCATTTCAATTTTATGGCTAAACATGGAACCAATCCTTCGAATGCTAGGTCAAGACCCTGAAGTCACAAAAGTTGCCCAAGTTTACATGGTCTTCTCTATTCCAGAGTTGCTAGCACAGGCTCATCTTAATCCATTGAGGACCTTCTTAAGAACCCAAGGCTTAACCACCCCAGTCACTGTAGCTGCATCTTGTGCAGCACTCTTGCACCTTCCCATCAACTATTTTTTGGCCACATACTTGAACTTGGGGGTAAAGGGTATTGCATTAGCCACTGGTTTGAACTCTATAAACATGACTTTGGGCTTGATGCTCTATGTTTTCTTCTCAAACAAACCACTCAAACCCTGGCAAGGAGCTACTGTTCTCTCAGCCTTTCATGGGTGGAAACCACTGCTGAGTTTGGCATTGCCTAGTTGCATCTCAGTGTGCTTGGAGTGGTGGTGGTATGAGATTATGCTCTTTCTCTGTGGCTTGTTAAGCAATCCACAAGCCACTGTTGCTACCATGGGAATCCTTATTCAAACACTTGGCTTCTTGTATGTGTTCCCATTTTCTCTTAGTATAGCCTTAACAACAAGAATCGGTCACTCCTTAGGTGCAGGGCAAGCATCCAAGGCACAAAGTACTGCCATAATTGGGTTCATCACAGCATTTACTCTGGGCATCACTGCCTTCATTTTGTTGTTTCTTGTGAGGAAATCATGGGCGAAACTTTTCACTGATGAGATACAAATTGTTGATCTGGTCACAACTATACTTCCCATTCTTGGGCTGTGTGAGATTAGCAATTGGCCTCAAACAGTTTCATGTGGGATTTTGTCAGGGACTGCTAGGCCTTATTTGGGTGCCAGAATAAACTTGTGTGCATTCTATCTGGTGGGATTGCCAGTTTCTGTTTTTGCTACTTTTGTATACAAGTATGAATTGGTGGGTTTGTGGTCTGGAATGGTTGCTGCACAGGCTTCTTGTCTTTGCATGATGGTTTACACATTGATTCAAACAGATTGGGGGCAGCAATGTAAGAGGGCAGTGGAACTGGCTCAGAAAACAACAGATCAGGAAAATAAAAATGATGAGGAAAGTGGGTTACTTGGTTCTGATCAATAA 1614 0.4331 MCTGAESRGNINGEAVIPKVGGDYEGNRMRTIEDGERERGCCNCGTFIQGLLQRLHHLLTALNLSISASELKEELQSLAKVACPIIMTSLMMYSRSAVSMLFLGRQGKVELAGGSLALGFANITANSVLKGLTMGMDPICCQAFGAKRWSVLNQTFFRTICLLLLVAIPISILWLNMEPILRMLGQDPEVTKVAQVYMVFSIPELLAQAHLNPLRTFLRTQGLTTPVTVAASCAALLHLPINYFLATYLNLGVKGIALATGLNSINMTLGLMLYVFFSNKPLKPWQGATVLSAFHGWKPLLSLALPSCISVCLEWWWYEIMLFLCGLLSNPQATVATMGILIQTLGFLYVFPFSLSIALTTRIGHSLGAGQASKAQSTAIIGFITAFTLGITAFILLFLVRKSWAKLFTDEIQIVDLVTTILPILGLCEISNWPQTVSCGILSGTARPYLGARINLCAFYLVGLPVSVFATFVYKYELVGLWSGMVAAQASCLCMMVYTLIQTDWGQQCKRAVELAQKTTDQENKNDEESGLLGSDQ 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g01432 537 PANTHER MULTIDRUG RESISTANCE PROTEIN 70 505 - -
Viun10g01432 537 Pfam MatE 84 244 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Viun10g01432 537 Pfam MatE 306 468 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Viun10g01432 537 NCBIfam MATE family efflux transporter 84 482 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Viun10g01432 537 CDD MATE_eukaryotic 74 511 IPR045069 GO:0042910|GO:1990961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g01432 Viun-Chr10 28670288 28676980 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g01432 K03327 - gmx:106798137 973.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g01180 5 8304641 8308789 Viun10g01432 10 28670288 28676980 PCT