Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g01189 ATGGGGGACTTCAACCTGGCGCTGGTGATCGTGGCGATCGTGGTATGCGTTATCGTATTCCTCGTCAACGTATATCTCCTCGTCAATTACCAGCACCCCGATGACTTTAACCAGGCCTACTTCCCCAAATTCGTCGTCGTTTTGGGGCTCTCCGTCGCCGCCATCTCCATCCTCATGCTTCCCGCCGACGTTGCCAACCGCCAGGCCTGTCGGCACTCGATCTACAATGGCGCGTGCAACCTCACGCTCCCCATGAAGGACCTCTGGCTCGCGGTGTACATCCTCGACGCGATCCTCGTCTTCTTCGTCATCCCCTTCGCCATGTTCTACTACGAAGGCGACCAGGACAAGACTGTTGGGAAGCGGATTAAGAGCGCGTTGTGTTGGATGGTGACCACTGCGATCGTCTGCGCTCTTATTTTGGGGATTTTGTATGGACTTATTGGAAAGGTGGACTTTACTGTTAGGCATCTCTCTTCTACCACAAAGTCATTTCCTAGTACATGGGAGTTCAGCAGTAGTCAACCATGTATTGAAAACACACATCAGTGTTCTGCATACACTGCCAGTCCTTCATCAGAGAAAACCTGGACCATGCGTACTACCTTTCCAGAATATGTTGTTGCTCTTGCCACTATAGTTGGATCTGTGCTTTTTGCTATATTTGGTGGTGTTGGTATTGCTTGTCTTCCATTGGGACTTATATTTTCTTTCATTCGGCGTCCAAAGGCTGTTATCACTCGTTCACAGTATATCAAGGAAGCTACAGAATTGGGAAAAAAAGCAAAAGATCTGAAGAAAGCAGCTGAGTCACTTCGTCAGGAAGAAAAAGGTGGTTCAAAGGGTAGGAAATTTCGTAAAAATGTAAAATCAGTGGAAAAGGAGTTGCTTCAATTAGAAGAAGATGTCAAACTTCTTGAAGAGATGTACCCACAAGGAGAAAAGGCTGAGGCAACATGGGCACTAACAGTTCTAGGGTATCTGGCAAAACTTGTTTTGGGAATTTTAGGGTTAATCGTATCTGTGGCATGGGTTGCTCACATCATTATCTATCTATTAGTTGATCCTCCTCTTTCTCCTTTCTTGAATGAAGTTTTCATCAAGCTGGATGATATCTGGGGTCTTCTTGGTACAGCTGCATTTGCATTCTTCTGCTTCTACCTTCTCCTTGCTGTGATTGCTGGAGCAATGGTGATTGGGCTGAGACTAGTTTTCTTTACTATTCATCCAATGAAGTGGGGAGCTACTCTCATGAACTCTTTTCTGTTCAATGTGGGGCTTATTCTTCTTTCTTCCATTAGTGTTATCCAGTTCTGCTCCACAGCATTTGCCTACTATGCTCAAGCAACTGCAGCACAGGAAATATTTGGCCACACCTTGGAGTCTCTTCGTGGGATTAAATATTTGTACAAATACAATGTCTTCCAGATCGCGTTTGTTGCATTGGCTGGGTTGACTTTTGTATATTATGCTGCATTTGGATGGAGAAGAAAGAAGCCCAGTGGCAGGTTCCAATTGTCTTCATGA 1527 0.4545 MGDFNLALVIVAIVVCVIVFLVNVYLLVNYQHPDDFNQAYFPKFVVVLGLSVAAISILMLPADVANRQACRHSIYNGACNLTLPMKDLWLAVYILDAILVFFVIPFAMFYYEGDQDKTVGKRIKSALCWMVTTAIVCALILGILYGLIGKVDFTVRHLSSTTKSFPSTWEFSSSQPCIENTHQCSAYTASPSSEKTWTMRTTFPEYVVALATIVGSVLFAIFGGVGIACLPLGLIFSFIRRPKAVITRSQYIKEATELGKKAKDLKKAAESLRQEEKGGSKGRKFRKNVKSVEKELLQLEEDVKLLEEMYPQGEKAEATWALTVLGYLAKLVLGILGLIVSVAWVAHIIIYLLVDPPLSPFLNEVFIKLDDIWGLLGTAAFAFFCFYLLLAVIAGAMVIGLRLVFFTIHPMKWGATLMNSFLFNVGLILLSSISVIQFCSTAFAYYAQATAAQEIFGHTLESLRGIKYLYKYNVFQIAFVALAGLTFVYYAAFGWRRKKPSGRFQLSS 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g01189 508 Coils Coil 255 275 - -
Viun10g01189 508 Pfam LMBR1-like membrane protein 9 276 IPR006876 -
Viun10g01189 508 Pfam LMBR1-like membrane protein 287 486 IPR006876 -
Viun10g01189 508 Coils Coil 282 309 - -
Viun10g01189 508 PANTHER LIMR FAMILY PROTEIN DDB_G0283707-RELATED 1 507 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g01189 Viun-Chr10 21775019 21780748 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g01189 K14617 - gmx:100800757 900.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g01349 5 10158480 10163927 Viun10g01189 10 21775019 21780748 PCT