Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00785 ATGGAGTTTGAAGACCGTTTCAGACACCAGGCTCAGAGACCAAAATATGATTGCCTTCTTTTTGATTTAGATGATACTTTGTATCCCCTCAAATCTGGTCTTGCAGAAGCATGTCTCAAAAATATTAAAGACTACATGGTTGAGAAGCTTGGCATACACCCAAGCAAAATTGATGACTTGTCCAACCTCCTTTACAAAAACTATGGAACAACTATGGCTGGTCTAAGGGCAATTGGATATGACTTTGACTATGATGAATATCATAGTTTTGTTCATGGGAGATTACCTTATGAGAACCTAAAACCAGACCCAGTTCTGAGGAACCTCTTGCTGAGCCTACCCTATAGGAAACTTATCTTCACAAATGCAGACAAAGTACATGCTGCTAAGGCCCTTAACAGGCTTGGATTAGAAGGCTGCTTTGAAGGAATCATATGCTTTGAGACCCTTAATCCAATCCACAAGAGCACTGTTTCTGATGATGAAGATGACATTGAGTTTATTGGTTCAAGGTCAACCAATCCAACCACTAGTAGTAATGCTCCAGCCACTTCTCAAATCTTTGACATCATAGAACATTTTGCCAAGCCCAACCCCTCTTCAGTCTTGCCAAAGACACCAATTATCTGCAAACCATCAGAAAATGCCATTGAATTGGCCCTCAACATAGCCAACCTCAAACCTCAAAGAACATTGTTCTTTGAGGACAGTACCCGTAACATACAAGCTGGAAAACGTGTGGGGCTTCACACTGTGCTGGTTGGTACATCACAGAGATGCAAAGGTGCAGATTATGCTTTGGAAAGCATTCACAACCTTAAGGAAGCTGTGCCAGAACTATGGGAAACTGATATCAAATCAGAAGTTGCATACCCTGGAAAACTAGCTGTGGAAACATCTGTCACAGCTTGA 912 0.4156 MEFEDRFRHQAQRPKYDCLLFDLDDTLYPLKSGLAEACLKNIKDYMVEKLGIHPSKIDDLSNLLYKNYGTTMAGLRAIGYDFDYDEYHSFVHGRLPYENLKPDPVLRNLLLSLPYRKLIFTNADKVHAAKALNRLGLEGCFEGIICFETLNPIHKSTVSDDEDDIEFIGSRSTNPTTSSNAPATSQIFDIIEHFAKPNPSSVLPKTPIICKPSENAIELALNIANLKPQRTLFFEDSTRNIQAGKRVGLHTVLVGTSQRCKGADYALESIHNLKEAVPELWETDIKSEVAYPGKLAVETSVTA 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00785 303 NCBIfam HAD-IA family hydrolase 209 254 IPR006439 -
Viun10g00785 303 SUPERFAMILY HAD-like 15 281 IPR036412 -
Viun10g00785 303 SFLD C1.5.3: 5'-Nucleotidase Like 10 283 IPR010237 -
Viun10g00785 303 Pfam Haloacid dehalogenase-like hydrolase 211 254 IPR041492 -
Viun10g00785 303 NCBIfam pyrimidine 5'-nucleotidase 17 254 IPR010237 -
Viun10g00785 303 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 10 283 - -
Viun10g00785 303 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE 6 302 - -
Viun10g00785 303 Gene3D - 82 281 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00785 Viun-Chr10 8856193 8859385 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00785 K07025 - gmx:100787007 576.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g01539 5 12709985 12713075 Viun10g00785 10 8856193 8859385 PCT