Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g01611 ATGGAAACGCGAGACGACACAAATCGGATTTCAAAAACTGATTCGACCTTCATCGAATTTCAACATCCGATGTACATGTTTTCAGATTTTGATATTCAAGAAGGGTTAATTATTGAAGATTTGGAGTGTCGTGGCTTTGAAACAATTACATGGGCAATTGGTTATCATAGTGATGGTGATTCTGATCATCATGTGGATTTTGTTTCTGGGAATGTGCAACTTATTACTACCAAAGAATCTTGGGACCAACATTTGGAACAAGCAAATAGGGATAGTAAAATTGTTGTTGCAAATTTCAGTGCAACATGGTGTGGTCCTTGTAAGATGATTGCTCCATATTTCTGCAACTTGTCCGAGAAGCACTCCTCTATCATGTTCTTATTAGTGGACGTGGATGAAATGACTGACTTCAGCACTTCCTTGGACATCAAAGCCACACCCACTTTCTTCTTTCTTAAAAATGGAAAAGAGTTTGACAAACTTGTAGGAGCCAACAAGCCAGAGCTGGAGAAGAGGATTGCTGCAATTACTGGTGGAGTTCCTCATTATCGACAGTGA 558 0.3943 METRDDTNRISKTDSTFIEFQHPMYMFSDFDIQEGLIIEDLECRGFETITWAIGYHSDGDSDHHVDFVSGNVQLITTKESWDQHLEQANRDSKIVVANFSATWCGPCKMIAPYFCNLSEKHSSIMFLLVDVDEMTDFSTSLDIKATPTFFFLKNGKEFDKLVGANKPELEKRIAAITGGVPHYRQ 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g01611 185 PANTHER THIOREDOXIN 72 174 - -
Vimu9g01611 185 Pfam Thioredoxin 75 173 IPR013766 -
Vimu9g01611 185 ProSiteProfiles Thioredoxin domain profile. 63 178 IPR013766 -
Vimu9g01611 185 SUPERFAMILY Thioredoxin-like 66 177 IPR036249 -
Vimu9g01611 185 Gene3D Glutaredoxin 53 179 - -
Vimu9g01611 185 CDD TRX_family 83 174 - -
Vimu9g01611 185 PRINTS Thioredoxin family signature 142 153 - -
Vimu9g01611 185 PRINTS Thioredoxin family signature 95 103 - -
Vimu9g01611 185 PRINTS Thioredoxin family signature 103 112 - -
Vimu9g01611 185 ProSitePatterns Thioredoxin family active site. 96 114 IPR017937 -
Vimu9g01611 185 FunFam Thioredoxin 68 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g01611 Vimu-Chr9 25387471 25391445 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g01611 K03671 - gmx:100527258 214.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g00202 6 2594770 2597021 Vimu9g01611 9 25387471 25391445 PCT