Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g01425 ATGGCCTCCAACCACCTTATCACCTTCACCCGCCGCCTCCTCCGCCTTCCGCCCACCGCCCGCCCCTTCTCCGCCGCCCCGATTACCTCCTCCTGCCCCGCCCCACCAATGCTCTACGACCGCCTCGCCTCCGCCACTATTGCCAAGCTCCGCCGCCTCGACCACCCCGACCCCCGCTTCCTCAAGCACGGCAACCCCGTCCCTTCCATCACCGACCACACGCCCGTCCTCGCCGCGCCCCAGACCCGCGTGACCACGCTCCCCAGCGGCCTTCGCGTCGCTACCGAGTCCTCACTCGCCGCGCGCACTGCCACCGTCGGCGTTTGGATCGATGCGGGGTCGCGGTTCGAGACTGAGGAAACCAACGGCACCGCGCATTTCCTCGAACACATGATCTTCAAGGGCACCGCGAAGCGCACCGTGAGGGAGCTCGAGGAGGAGATCGAGAACATGGGAGGGCATCTCAATGCGTACACCTCACGCGAACAGACCACGTACTACGCTAAGGTCATGAACAAGGATGTTCCCAAGGCTCTTGATATTCTGGCTGACATCTTACAGAATTCGAAGTTCGATGATAATAGGATTATCCGTGAGCGTGACGTGATTCTGAGAGAAATGGAAGAGGTTGAGGGACAAATGGAAGAAGTAATCTTTGACCATTTACATGCAACTGCTTTCCAGTACAGTCCACTTGGTAGAACAATTCTTGGACCTGCTCAGAATATCAAGACAATCACTAAAGATCATCTGCAAAACTACATTCAGACACACTACACAGCTCCTAGAATGGTGGTTGCCGCATCTGGAGCTGTCAAGCATGAAGAAATTGTTGAGCAAGTAAAAGCGTTGTTTACTAAGTTGTCAACAGATCCCACCACAGCTTCTCAATTAGCTGCAAAAGAACCAGCCATTTTTACCGGTTCCGAGGCAAGATCATTAGAAATTTTGGATGATGATATTCCCCTAGCACAATTTGCTGTAGCTTTTGAAGGTGCTGCCTGGACAGATCCTGATTCCGTTGCTCTGATGGTCATGCAAGCTATGTTGGGTTCTTGGAATAAATCCACAGGAAGTGGAAAGCACATGGGCTCTGGGTTGGCGCAACGAGTTGGCATTAATGAAGTTGCAGAAAGCATTATGGCCTTCAATACTAATTACAAGGATACAGGTCTCTTTGGTGTTTATGCTGTTGCTAAGAAGGATTGCTTGGATGACTTAAGCTATGCAATAATGAATGAGACAACCAAGTTGGCTTATAAGGTTTCACAAGATGATGTTATTCGAGCTCGTAATCAGTTGAAATCTTCACTCCTGCTCCACATAGATGGAACAAGTCCAGTAGCTGAAGATATTGGGCGCCAGCTACTCACCTACAACAGAAGAATACCATTTGCAGAATTATTTGCTAGAATTGATGCTGTTGATGCAAGCACAATAAAACGTGTTGCTAACAGATTTATTTATGACAAGGATATTGCAATTGCTGCTATGGGACCTGTTCAGCGTTTGCCTGATTACAACTGGTTCAGACGAAGAACCTACTGGAATCGATATTAG 1560 0.4981 MASNHLITFTRRLLRLPPTARPFSAAPITSSCPAPPMLYDRLASATIAKLRRLDHPDPRFLKHGNPVPSITDHTPVLAAPQTRVTTLPSGLRVATESSLAARTATVGVWIDAGSRFETEETNGTAHFLEHMIFKGTAKRTVRELEEEIENMGGHLNAYTSREQTTYYAKVMNKDVPKALDILADILQNSKFDDNRIIRERDVILREMEEVEGQMEEVIFDHLHATAFQYSPLGRTILGPAQNIKTITKDHLQNYIQTHYTAPRMVVAASGAVKHEEIVEQVKALFTKLSTDPTTASQLAAKEPAIFTGSEARSLEILDDDIPLAQFAVAFEGAAWTDPDSVALMVMQAMLGSWNKSTGSGKHMGSGLAQRVGINEVAESIMAFNTNYKDTGLFGVYAVAKKDCLDDLSYAIMNETTKLAYKVSQDDVIRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYNRRIPFAELFARIDAVDASTIKRVANRFIYDKDIAIAAMGPVQRLPDYNWFRRRTYWNRY 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g01425 519 Pfam Insulinase (Peptidase family M16) 92 239 IPR011765 -
Vimu9g01425 519 Gene3D - 71 291 - -
Vimu9g01425 519 Coils Coil 141 161 - -
Vimu9g01425 519 PANTHER METALLOPROTEASE 77 505 - -
Vimu9g01425 519 FunFam Mitochondrial-processing peptidase subunit beta, mitochondrial 302 519 - -
Vimu9g01425 519 Gene3D - 313 519 - -
Vimu9g01425 519 SUPERFAMILY LuxS/MPP-like metallohydrolase 77 285 IPR011249 GO:0046872
Vimu9g01425 519 ProSitePatterns Insulinase family, zinc-binding region signature. 113 136 IPR001431 GO:0004222|GO:0006508
Vimu9g01425 519 FunFam Mitochondrial-processing peptidase subunit beta 69 290 - -
Vimu9g01425 519 Pfam Peptidase M16 inactive domain 246 434 IPR007863 -
Vimu9g01425 519 SUPERFAMILY LuxS/MPP-like metallohydrolase 316 509 IPR011249 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g01425 Vimu-Chr9 22897045 22900650 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g01425 K17732 - gmx:100800696 895.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g03981 6 39447716 39455146 Vimu9g01425 9 22897045 22900650 PCT