Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g03981 ATGTCCCTCAACCGCCTCCTCTCCGCGGCCCGCCGCTCCGACCGGCGGGCCTCCGCACTCTCCTCCTTCCGATCTCTCTCCGCCTCCCCCGCTCTCGCCCCCTCCTCCGCCTCCCCTCCCGCTCCTCCGCCCCCCACCGCCATGATCTACGACCGCGCTGCCGAGGCCATCAAGTCCAAGCTCCGCCAGCTCGAGAACCCGGACCCCCGCTTCCTCAAACACGGCAACCCCCGCCCCACGCTTTCAGACCACACTCGCATCCTCGCTGCCCCTGAGACGCGCGTTACCACGCTCCCTAATGGCCTCCGAGTCGCCACCGAATCCTCCCTCGCCGCCCGAACCGCCACCGTCGGCGTATGGATCGACGCCGGCTCGCGCTTCGAGACCGAGGAGACCAACGGCACCGCGCACTTCCTGGAGCACATGATCTTCAAGGGCACAGAGCGCCGCAACGCGCGTGAGCTTGAGGAAGAGATCGAAAACATGGGAGGGCATCTCAACGCGTACACCTCACGCGAACAGACCACATATTACGCTAAGGTTACCGATAGCGATGTCCCCCAAGCCCTCGACATCCTCGCCGACATTCTTCAGAATTCTCGATTTGAGGAAAATCGCATCAGCCGCGAACGTGATGTTATTCTCCGTGAAATGGAGGAGGTTGAGGGTCAAACTGAGGAAGTGATCTTTGACCACCTACACGCAACTGCGTTCCAATACACTCCTCTTGGAAGGACCATTCTTGGACCTGCTCAGAACATTAAGACAATCACCAAAGCTCATCTGCAGAGCTACATTCAGACACATTACACGGCTCCTAGGATGGTGATAGCTGCATCTGGAGCTGTAAAACATGAGGATATTGTTGAGCAAGTGAAAAAGTTGTTTACTAAGTTGTCGACAGATGCCACTACCACGGCTCAATTAGTTGCTAAAGAGCCAGCTATTTTTACTGGTTCCGAGGTTAGAATGCTTGATGATGATATTCCCCTTGCACAATTTGCGGTGGCTTTTGAGGGGGCATCGTGGAAGGACCCAGACTCAATTGCTCTCATGGTCATGCAAGCTATGTTGGGCTCTTGGAATAAGACTGCAGGAGGTGGTAAACACATGGGTTCTGAGTTAGCTCAACGGGTTGGTATTAATGAAGTTGCAGAGAGCATTATGGCTTTCAATACCAATTACAAGGACACAGGTCTTTTTGGTGTTTATGCCGTTGCTAAGCCTGATAGCTTGGATGATTTGTCATATGCAATAATGCAAGAGACAACCAAATTGGTTTATCGTGTTTCAGAAGATGATGTTACACGTGCTTGTAATCAGTTGAAATCTTCATTGCTACTACACATTGACGGAACAAGTCCAGTGGCTGAAGATATTGGCCGTCAGCTGCTTACCTATGGTAGGAGAATCCCGTTTGCTGAATTGTTTGCTAGAATTGATGCGGTTGATGCCAGTACAATTAAACGGGTTGCAAACAGGTTTATTTATGACAAGGATGTAGCTATTGCTGCCATGGGTCCTATTCAGCGTTTGCCCGACTACAACTGGTTCAGACGCAGAACCTACTGGAACAGATATTAG 1584 0.5221 MSLNRLLSAARRSDRRASALSSFRSLSASPALAPSSASPPAPPPPTAMIYDRAAEAIKSKLRQLENPDPRFLKHGNPRPTLSDHTRILAAPETRVTTLPNGLRVATESSLAARTATVGVWIDAGSRFETEETNGTAHFLEHMIFKGTERRNARELEEEIENMGGHLNAYTSREQTTYYAKVTDSDVPQALDILADILQNSRFEENRISRERDVILREMEEVEGQTEEVIFDHLHATAFQYTPLGRTILGPAQNIKTITKAHLQSYIQTHYTAPRMVIAASGAVKHEDIVEQVKKLFTKLSTDATTTAQLVAKEPAIFTGSEVRMLDDDIPLAQFAVAFEGASWKDPDSIALMVMQAMLGSWNKTAGGGKHMGSELAQRVGINEVAESIMAFNTNYKDTGLFGVYAVAKPDSLDDLSYAIMQETTKLVYRVSEDDVTRACNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDAVDASTIKRVANRFIYDKDVAIAAMGPIQRLPDYNWFRRRTYWNRY 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g03981 527 Gene3D - 80 305 - -
Vimu6g03981 527 ProSitePatterns Insulinase family, zinc-binding region signature. 124 147 IPR001431 GO:0004222|GO:0006508
Vimu6g03981 527 Pfam Insulinase (Peptidase family M16) 103 250 IPR011765 -
Vimu6g03981 527 MobiDBLite consensus disorder prediction 19 34 - -
Vimu6g03981 527 PANTHER METALLOPROTEASE 89 513 - -
Vimu6g03981 527 Coils Coil 152 172 - -
Vimu6g03981 527 Gene3D - 309 527 - -
Vimu6g03981 527 MobiDBLite consensus disorder prediction 1 46 - -
Vimu6g03981 527 Pfam Peptidase M16 inactive domain 257 442 IPR007863 -
Vimu6g03981 527 FunFam Mitochondrial-processing peptidase subunit beta 80 301 - -
Vimu6g03981 527 SUPERFAMILY LuxS/MPP-like metallohydrolase 321 517 IPR011249 GO:0046872
Vimu6g03981 527 SUPERFAMILY LuxS/MPP-like metallohydrolase 90 302 IPR011249 GO:0046872
Vimu6g03981 527 FunFam Mitochondrial-processing peptidase subunit beta, mitochondrial 313 527 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g03981 Vimu-Chr6 39447716 39455146 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g03981 K17732 - gmx:100777553 927.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g03981 6 39447716 39455146 Vimu9g01425 9 22897045 22900650 PCT