Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g01381 ATGGAGCATTTGGGTCAGAATGGTTTGATCTCTGAGCATGAAAATGGAATCACTTTGTGCTGTGATGAAGAGTGTTCTGAGAAAGAAAGAGTTACAACTTCCATTCAGTATGCTGTCAAAGTCTTGTTGATGGGTTTAGGAGAAGATATCAACAGAGAAGGCATTAGAAAAACACCACTTCGTGTTGCCAAGGCCCTTTGTGAAGGAACCAGAGGTTATGTTAAAAGTGTTAAGGAAATTGTGGAAGGTGCATTATTCCCTGAAGGCGGAGTAGAAAAGAACAAAGTTGGAGATGCAGGTGGAGTAGGTGGACTTGTGATTGTGAGAGACCTTGATTTTTACTCTTACTGTGAGTCTTGCATGCTACCATTCTATTTCAAGTGTCATGTGGGCTATGTCCCTTCTGCTCAAAGAGTTCTGGGTTTAAGCAAACTCTCTCGTGTCACCAATGTCTTTGCAAAACGTTTCCAAGAGCCTCAGCGTCTTGCAAATCAGGTTTGTTCAGCTTTGCATGAAGGAATACAACCCACAGGCGTTGCTGTTGTGCTTCTATGCAAACACATTCCCTTTCCAGATATGGAATCAAATTCTCTTCATTCAAACCACAAAGGGGTGCTGGGAATACTCGTTTCTTCAGGCTCTGGTGTTTTTGAAAACAAAGATGCAAACTTGTGGGCTGACTTTTTTGGCCTCCTTAACTTTAGGGGCATTGACAAGGACAAAATTATTGATAAGGGCTCATTGGACCACTGTTGGTGTCCTTCTTTGTCTTCTAAAGTTTCACCAAGGAATGAAGAAATGAACCCTGCTATGGTCACTGCAGTAGCTTCAATTCTCAAGTCTTTAGGTGAGGATCCAACTAGGAAGGAATTACAAGGGACTCCTGCTAGATATACCAAGTGGCTGATGAACTTCCAGTGTAATAGCATTGAGAAGGCGCTGAATGGTTCGCTTGGGAGTTGTACAAATGGTGCTTTGAAAACTAATTGTGTGGTAGGTTTTGATGAAAAGATACACTCAGAGCTGAACTTGCCTTTCTTGTCACAGTGTGAGCATCATTTGCTTCCATTTCATGGTGTTGTTCACATAGGATACTACATTTCCAAAGGGTTTCATCCCATTGAGAAAAGGCTCTTGCAGTCAATAGTGCACTTTTATGGTATTAAGCTGCAGGTTCAAGAAAGGGTGACCAAGCAAATCGCGGAAACGGTTTCTGCATTGATAGGTGAAAATGTGATAGTAGTGGTGGAAGCAAGTCACACCTGTATGATTTCTCGGGGAATTGAGAAGTTCGGTAGTAATACTGCTACCATTGCTGCATTGGGACGCTTTTCAACTGACCTTGCTGCAAGGGTTGTGTTCCTCAACAGTATTCCAAATGATACATAA 1389 0.4219 MEHLGQNGLISEHENGITLCCDEECSEKERVTTSIQYAVKVLLMGLGEDINREGIRKTPLRVAKALCEGTRGYVKSVKEIVEGALFPEGGVEKNKVGDAGGVGGLVIVRDLDFYSYCESCMLPFYFKCHVGYVPSAQRVLGLSKLSRVTNVFAKRFQEPQRLANQVCSALHEGIQPTGVAVVLLCKHIPFPDMESNSLHSNHKGVLGILVSSGSGVFENKDANLWADFFGLLNFRGIDKDKIIDKGSLDHCWCPSLSSKVSPRNEEMNPAMVTAVASILKSLGEDPTRKELQGTPARYTKWLMNFQCNSIEKALNGSLGSCTNGALKTNCVVGFDEKIHSELNLPFLSQCEHHLLPFHGVVHIGYYISKGFHPIEKRLLQSIVHFYGIKLQVQERVTKQIAETVSALIGENVIVVVEASHTCMISRGIEKFGSNTATIAALGRFSTDLAARVVFLNSIPNDT 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g01381 462 PANTHER GTP CYCLOHYDROLASE I 24 188 IPR001474 GO:0003934|GO:0046654
Vimu9g01381 462 Gene3D - 334 461 IPR043133 -
Vimu9g01381 462 Gene3D - 100 235 IPR043133 -
Vimu9g01381 462 Gene3D - 259 310 IPR043134 -
Vimu9g01381 462 Gene3D - 22 80 IPR043134 -
Vimu9g01381 462 SUPERFAMILY Tetrahydrobiopterin biosynthesis enzymes-like 248 459 - -
Vimu9g01381 462 FunFam GTP cyclohydrolase 1 100 235 - -
Vimu9g01381 462 Pfam GTP cyclohydrolase I 273 458 IPR020602 -
Vimu9g01381 462 Pfam GTP cyclohydrolase I 36 188 IPR020602 -
Vimu9g01381 462 SUPERFAMILY Tetrahydrobiopterin biosynthesis enzymes-like 23 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g01381 Vimu-Chr9 22234645 22242527 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g01381 K01495 - gmx:100792313 675.241
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g04005 6 39913204 39916555 Vimu9g01381 9 22234645 22242527 PCT