Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g04005 TTGTTTTATTTTTGTGGTGTTTCAATGGGGTGTTTGGATGATGGGCGTTTCGCTGTTGAGATTGAAAATGGAGTGAGCAATGGTTGTGGTGAAGTGGGGTTAGGGAATGATGGTGGTACCATTGAGGAGGCTGTAAAGGTTTTGTTGGAGGGTCTTGGGGAAGATGTGAACAGGGAAGGACTGAGAAAGACACCACTTCGTGTTGCCAAGGCCCTTAGTGAAGGAACCAGAGTGTACTATCTGTTCTTTCCTTTTAAGTTGGACTGCCCTGCTGTGAAAGGGATGGACATAGGTGTCTTCCATCCTATGGATGCAGTTGCTAGGTGCATTTTCTTCAATCCCTTGACATTGCATATGCAGTTGGGTATTGTTGTATTAAGATACAAATTATCATATTTCTTGAATAATAAATTATTACCAATAGTAAGGATATCTCTTCTTCCAGGGTACAAGCAAAAGGTGAAGGACATTGTTCAAGGTGCTTTGTTCCCTGAAGCTGGTCTAGATAATAGAGTTGGTCATGCGGGTGGAGCAGGTGGACTTGTGATTGTTAGAGATCTTGACCTGTTTTCTTATTGTGAGTCTTGCTTACTTCCATTCCAGGTCAAGTGTCATGTGGGTTATGTCCCCTCTGGTGAAAGAGTTGTTGGTTTGAGCAAGCTCTCTCGTGTTGCTGATGTATTTGCAAAACGGCTTCAAGAGCCTCAACGTCTGGCAGATGAGATGTGTTCTGCTTTGCATCAGGGAATAAAGCCTGCAGGTGTCGCTATCGTACTTCAGTGTACACACATACACTTTCCAGACATAGATTCAGTCTTTCTGGACACAAACCACGAAGGATGGGTTAAGATACTTGTTTCCTCAGGTTCTGGGGATTTTGAGAACAAAAGTGCAGATGTATGGAACGATTTCTTTAGTCTTCTTAAGTTCAGAGGTTTCAGTATGGATAAAATTCACTTCAGAGGATCATCTGACCCATGCTGGTGTCCTTCTCAGTCTTCTCTCTCAGCCAAAGTTTCCTCCAAAATTGGACCAGTCAATCCTACAATGATCTCTGCTGTATCTTCGATCATTGAATCTTTGGGAGAAGATCCTTTAAGGAACGAGCTAATAGGGACCCCAAGTAGATTTGTGAAATGGTTGATGAACTTTCAAAACAGTAAGTTTGATGTGAAGTTGAATGGTTTTCTTCGTGGTGGGATGGATGCTTTGAATGTAAATGAGGAGAATAACTTAAACAAAAAAATAACCTCTGAGCTGAATATACCCTTTTGGTCACAATGTGAGCATCATTTACTTCCATTTCATGGTGTTGTTCACATAGGGTACCTCATATCTGACGGATTCAATCCTATTGGAAAATCACTTCTACAATCAATAGTACATTTTTATGGTTTCAAGCTTCAAGTTCAGGAAAGGCTTACCAGGCAGATAGCTGAAACCATTTCCCCACTGTTAGGTGGAGATGTGATTGTAGTTGTAGAGGCAAGTCACACATGTATGATCTCTAGGGGAATTGAGAAGTTTGGAAGTAGTACGGCTACGATTGCCGTGTTAGGACGTTTTTCAACTGACACCTCTGCCAGAGCCTCATTCTTGCAGAGTATTCCAAGTCCTACATCAACTGGGGAGCAATGA 1638 0.42 MFYFCGVSMGCLDDGRFAVEIENGVSNGCGEVGLGNDGGTIEEAVKVLLEGLGEDVNREGLRKTPLRVAKALSEGTRVYYLFFPFKLDCPAVKGMDIGVFHPMDAVARCIFFNPLTLHMQLGIVVLRYKLSYFLNNKLLPIVRISLLPGYKQKVKDIVQGALFPEAGLDNRVGHAGGAGGLVIVRDLDLFSYCESCLLPFQVKCHVGYVPSGERVVGLSKLSRVADVFAKRLQEPQRLADEMCSALHQGIKPAGVAIVLQCTHIHFPDIDSVFLDTNHEGWVKILVSSGSGDFENKSADVWNDFFSLLKFRGFSMDKIHFRGSSDPCWCPSQSSLSAKVSSKIGPVNPTMISAVSSIIESLGEDPLRNELIGTPSRFVKWLMNFQNSKFDVKLNGFLRGGMDALNVNEENNLNKKITSELNIPFWSQCEHHLLPFHGVVHIGYLISDGFNPIGKSLLQSIVHFYGFKLQVQERLTRQIAETISPLLGGDVIVVVEASHTCMISRGIEKFGSSTATIAVLGRFSTDTSARASFLQSIPSPTSTGEQ 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g04005 545 FunFam GTP cyclohydrolase 1 407 538 - -
Vimu6g04005 545 FunFam GTP cyclohydrolase 1 176 311 - -
Vimu6g04005 545 Gene3D - 346 388 IPR043134 -
Vimu6g04005 545 Gene3D - 36 80 IPR043134 -
Vimu6g04005 545 SUPERFAMILY Tetrahydrobiopterin biosynthesis enzymes-like 30 73 - -
Vimu6g04005 545 SUPERFAMILY Tetrahydrobiopterin biosynthesis enzymes-like 346 537 - -
Vimu6g04005 545 Gene3D - 175 311 IPR043133 -
Vimu6g04005 545 SUPERFAMILY Tetrahydrobiopterin biosynthesis enzymes-like 146 308 - -
Vimu6g04005 545 Gene3D - 405 538 IPR043133 -
Vimu6g04005 545 PANTHER GTP CYCLOHYDROLASE I 40 79 IPR001474 GO:0003934|GO:0046654
Vimu6g04005 545 Pfam GTP cyclohydrolase I 178 264 IPR020602 -
Vimu6g04005 545 Pfam GTP cyclohydrolase I 352 536 IPR020602 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g04005 Vimu-Chr6 39913204 39916555 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g04005 K01495 - gmx:100816351 718.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g04005 6 39913204 39916555 Vimu9g01381 9 22234645 22242527 PCT