Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g01351 ATGGCATCCGGTACTTTTCTCAATGTGACACTTCTGCAGCAACGTTCTCATGTACCCAAATTTGGCAATTGGGATAGTGGAGAGAATGTTCCTTATACAGCATATTTTGACAAGGCCCGGAAAGGCCGAACTGGTGCAAGAATAATAAATCCAAATGACCCTGAAGAAAATTCTGATTTAGGTCTTGACAATCCATCATCTGAGCAACTACCTCCATCCAAACCCAGAGTTAGTTCAGAGGATCCATCTGGAAAGGGATCACTGCCTTTGGAAGATGATCCTAAGCATTTCATTGACTCTCCAGCTCGTCATGACAATGTAAGCAATAGGACTAGCAGCAGAAGCCATGGAGTAACTTCTGCCGATAACCGTAGAAGACATTCTACGCAAAGTGTTGGGTCCGACCACAGCATTGACCGTTCTCCACTTCATCGCCAGGCCAGACCCCCTGGCAGAGACAGTCCCCAATGGGAACCAAAGAATTCATATGACAACATCCAGGGAACACCAGGGAGATCTCGGTTAAGACAGGCTAACAGGGGAGATGAAACAGTTAGTTTCCTTTTCTACTTCCTTTGTTTTACCATGCATGGCTTGATAAAAAGAAATAGAAATTTTGTACATGTAGTAAGTAGGCCAAACTAG 645 0.4434 MASGTFLNVTLLQQRSHVPKFGNWDSGENVPYTAYFDKARKGRTGARIINPNDPEENSDLGLDNPSSEQLPPSKPRVSSEDPSGKGSLPLEDDPKHFIDSPARHDNVSNRTSSRSHGVTSADNRRRHSTQSVGSDHSIDRSPLHRQARPPGRDSPQWEPKNSYDNIQGTPGRSRLRQANRGDETVSFLFYFLCFTMHGLIKRNRNFVHVVSRPN 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g01351 214 MobiDBLite consensus disorder prediction 119 147 - -
Vimu9g01351 214 MobiDBLite consensus disorder prediction 86 103 - -
Vimu9g01351 214 MobiDBLite consensus disorder prediction 57 76 - -
Vimu9g01351 214 MobiDBLite consensus disorder prediction 45 177 - -
Vimu9g01351 214 MobiDBLite consensus disorder prediction 158 174 - -
Vimu9g01351 214 Pfam Cleavage site for pathogenic type III effector avirulence factor Avr 14 43 IPR008700 -
Vimu9g01351 214 MobiDBLite consensus disorder prediction 104 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g01351 Vimu-Chr9 21790789 21795173 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g01351 K13456 - gmx:100499218 320.857
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g04028 6 40312369 40315793 Vimu9g01351 9 21790789 21795173 PCT