Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g01341 ATGACTTGTGATTGTGAAGATCGCAAGGTTAGCGCTCAAGATCTACGCCTCAAGCTTCAAAGGAAAGGTCTTCAACCTGCATCTCAGAGCGGAAAGAGTTATGCTCCAAAGATGCGGGATCTCCGTGAAAGGCTATCAGGGACAATGACAGTACAACCTACCAATGTTGATCCGCCCAAATCAAAAACTGTTAAACCAAGCAGTAAAAGTGTTGGTGCTGAGGCCCCTGCAGCGCAGATCAAAAGGCCAGCTGACCCAGCTCCTAAAAGGTCACGGAAGGACCTTCATCAGAGTAGTTTTGCGGATAATGAGGACTGGTATATGCTGGCTGATTCTTCAATTGATGACTTTTTGCGGTCCTTGGGTCTTGAAAAGTACATCATTACTTTTCAGGCTGAAGAAGTTGATATGACAGCTCTCAATCATATGACTGATGAAGATCTCAAGGCTATGGGTATACCAATGGCATCTAGCTTTCATATGATGAGGCTCATAGAAAGTAGACTTTAA 510 0.4431 MTCDCEDRKVSAQDLRLKLQRKGLQPASQSGKSYAPKMRDLRERLSGTMTVQPTNVDPPKSKTVKPSSKSVGAEAPAAQIKRPADPAPKRSRKDLHQSSFADNEDWYMLADSSIDDFLRSLGLEKYIITFQAEEVDMTALNHMTDEDLKAMGIPMASSFHMMRLIESRL 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g01341 169 Gene3D - 111 169 IPR013761 -
Vimu9g01341 169 MobiDBLite consensus disorder prediction 47 68 - -
Vimu9g01341 169 CDD SAM_superfamily 116 164 - -
Vimu9g01341 169 Pfam SAM domain (Sterile alpha motif) 112 153 IPR001660 GO:0005515
Vimu9g01341 169 PANTHER SCP160 63 154 - -
Vimu9g01341 169 SUPERFAMILY SAM/Pointed domain 110 163 IPR013761 -
Vimu9g01341 169 ProSiteProfiles SAM domain profile. 109 153 IPR001660 GO:0005515
Vimu9g01341 169 SMART SAM_4 106 165 IPR001660 GO:0005515
Vimu9g01341 169 MobiDBLite consensus disorder prediction 18 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g01341 Vimu-Chr9 21649254 21651614 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g01341 7 156 Glycosyltransferase AT3G07170 50.000 1.23e-36 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g01341 - - gmx:100784706 209.149
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g04035 6 40383328 40391971 Vimu9g01341 9 21649254 21651614 PCT