Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g04035 ATGTATGCTGATCGGGTGGAGACTGGAACTCGGAGGTCAGTGAAAGAACGTCTTGATGGGAATTTCCTCACCGATTCTACTCGCCAACACAAAGTCACCGGAAAGAGGCAGAGGCAGGATGACAAGTGGAAACATGATCTCTATGACGATGATGAACCCCAGCTCTATAATCGCAAGGTCACTGCTCAAGATCTTCGTTTGAAGCTTCAAAAGAAAGGCCTGCATCCTGGAGGTCAAACTGGAAAGAGTTCTGTTCCTGTTGAGAGGGATCTCCGTGAAAGGCTATCAGGGACAATGACTCCACAACCTAAAAACTATGACCCACCAAAGCCCAAAGTGACTGCTAAACCAAGCAGTAAAAGTATAGATGTTGAGACCCCTTCAGTACATGTCAAAAGATCAGCTAACCCAACTCCTAAAAAGGTGTCCCGAAAGGCTGACTCTTCACTGGATGAATTTTTGCTGTCACTGGGTCTCGAAAAGTATCTCATAAGTTTTCAGGCTGAGGAAGTTGATATGACTGCACTCAATCATATGACGGATGAGGATCTGAAGGCCATGGGTATTCCAATGGTACGTATCATCGAGGAGCGTGGATTCCCCACTCCCACAAATTCCTAA 621 0.4605 MYADRVETGTRRSVKERLDGNFLTDSTRQHKVTGKRQRQDDKWKHDLYDDDEPQLYNRKVTAQDLRLKLQKKGLHPGGQTGKSSVPVERDLRERLSGTMTPQPKNYDPPKPKVTAKPSSKSIDVETPSVHVKRSANPTPKKVSRKADSSLDEFLLSLGLEKYLISFQAEEVDMTALNHMTDEDLKAMGIPMVRIIEERGFPTPTNS 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g04035 206 CDD SAM_superfamily 149 189 - -
Vimu6g04035 206 PANTHER SCP160 96 190 - -
Vimu6g04035 206 MobiDBLite consensus disorder prediction 94 143 - -
Vimu6g04035 206 SUPERFAMILY SAM/Pointed domain 144 191 IPR013761 -
Vimu6g04035 206 ProSiteProfiles SAM domain profile. 145 189 IPR001660 GO:0005515
Vimu6g04035 206 Gene3D - 142 194 IPR013761 -
Vimu6g04035 206 Pfam SAM domain (Sterile alpha motif) 146 189 IPR001660 GO:0005515
Vimu6g04035 206 MobiDBLite consensus disorder prediction 1 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g04035 Vimu-Chr6 40383328 40391971 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g04035 37 191 Glycosyltransferase AT3G07170 58.333 5.83e-55 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g04035 - - gmx:100527300 339.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g04035 6 40383328 40391971 Vimu9g01341 9 21649254 21651614 PCT