Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g01281 ATGGCCACCAACGATCTCCGATTCTTCGAGTTGAACATCGGAGCAAAGATACCTTCAGTTGGTTTGGGCACCTGGCTCGCTGAACCTGGCGTTGTTGCTCACGCTTTGGCCATTGCAATAAACGTTGGTTACCGGCATAGGCAAAGCCACAAGACTCTGACACATGCACACCCTGACGTCACACTCATAGATTTTGAGTTACCAAAGTTGAGAAAAATGTCCGATGCAGTTAGTTTATTTGAATTGAACACAGGAGCCAAAATACCTTCAATTGGGTTAGGCACATATAAGGTTGTTCCTACTACTGTAATCAGTGCCATCGAGGTGGGTTACAGGCATATCGACTGTGCTGAAGCCTATGCTAATCAAGCCGAGATTGGTTCTGCTCTGAAGAAGCTTTTTGAAAGTGGTGTTGTGAAGCGTGAAGACTTGTGGATTACCTCCAAACTCTGGAACACAGATCATGATCCAGAAGATGTACCAAAAGCACTTGAAAGAACTTTACAACAATTGCAACTTGACTACGTAGATCTCTATCTAATACATTGGCCAGTGAAGATGAAAAAGGGATCAGTAAAACCTGAAAATGTTGTACAACATGACATACCAAGCACATGGAGAGCAATGGAAGCTCTCTATGACTCAGGCAAGGCTAAAGCCATAGGAGTGAGCAATTTCTCTTCAAAAAAGCTTCAAGATTTGTTGGATATAGCAAGAGTGCCTCCTGCTGTTAACCAAGTGGAATGCCACCCACAATGGCAGCAGCCAAAGTTGCATGCATTCTGTGAATCCAAAGGAATTCACCTATCTGGATTTTCTCCATTGGGGACACAAGAATTTCGTAGCAGTGATGAAGTGCTTAAGAATCCTGTTCTCAATAAAGTTGCTGAGAAACTGGGGAAAACACCAGCTCAAGTAGCCCTTCGGTGGGGCATTCAAACGGGCCATAGTGTGCTACCAAAGACCTCTACTGAGTCCAGGCTCAAGGAAAATTTTGATATCTTCAACTGGTCTATTCCAGAGGACCTGATGGCTAAGTTTTCTGAAATTAAACAGGCTAGTATTATTCTGTTTTCTTTCAAAATATTATAA 1092 0.4295 MATNDLRFFELNIGAKIPSVGLGTWLAEPGVVAHALAIAINVGYRHRQSHKTLTHAHPDVTLIDFELPKLRKMSDAVSLFELNTGAKIPSIGLGTYKVVPTTVISAIEVGYRHIDCAEAYANQAEIGSALKKLFESGVVKREDLWITSKLWNTDHDPEDVPKALERTLQQLQLDYVDLYLIHWPVKMKKGSVKPENVVQHDIPSTWRAMEALYDSGKAKAIGVSNFSSKKLQDLLDIARVPPAVNQVECHPQWQQPKLHAFCESKGIHLSGFSPLGTQEFRSSDEVLKNPVLNKVAEKLGKTPAQVALRWGIQTGHSVLPKTSTESRLKENFDIFNWSIPEDLMAKFSEIKQASIILFSFKIL 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g01281 363 SUPERFAMILY NAD(P)-linked oxidoreductase 80 350 IPR036812 -
Vimu9g01281 363 Gene3D - 6 49 IPR036812 -
Vimu9g01281 363 ProSitePatterns Aldo/keto reductase family putative active site signature. 319 334 IPR018170 GO:0016491
Vimu9g01281 363 ProSitePatterns Aldo/keto reductase family signature 2. 209 226 IPR018170 GO:0016491
Vimu9g01281 363 PANTHER ALDO/KETO REDUCTASE 79 352 - -
Vimu9g01281 363 Gene3D - 78 360 IPR036812 -
Vimu9g01281 363 PIRSF AKR 73 359 IPR020471 GO:0016491
Vimu9g01281 363 PIRSF AKR 2 54 IPR020471 GO:0016491
Vimu9g01281 363 ProSitePatterns Aldo/keto reductase family signature 1. 110 127 IPR018170 GO:0016491
Vimu9g01281 363 PRINTS Aldo-keto reductase signature 166 184 IPR020471 GO:0016491
Vimu9g01281 363 PRINTS Aldo-keto reductase signature 243 272 IPR020471 GO:0016491
Vimu9g01281 363 PRINTS Aldo-keto reductase signature 209 226 IPR020471 GO:0016491
Vimu9g01281 363 PRINTS Aldo-keto reductase signature 286 310 IPR020471 GO:0016491
Vimu9g01281 363 PRINTS Aldo-keto reductase signature 106 130 IPR020471 GO:0016491
Vimu9g01281 363 CDD AKR_AKR4C1-15 80 357 IPR044498 GO:0016491
Vimu9g01281 363 FunFam NADPH-dependent aldo-keto reductase, chloroplastic 77 362 - -
Vimu9g01281 363 Pfam Aldo/keto reductase family 103 350 IPR023210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g01281 Vimu-Chr9 20818563 20822073 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g01281 K00002 - qsu:112024106 435.261
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g00061 6 755295 761952 Vimu9g01281 9 20818563 20822073 PCT