Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g00061 ATGACACAAGTTGTTAAGCCACATGAACCCAAGACACAGGCGTTTACACTTGCGAGTGGTCATACCATACCAGCTGTTGGATTGGGGACATGGAAGTCTGGTTCAGAGGCAGCCAATTCTGTGTTCACTGCTATTATTAATGCTGGTTACAGACACATAGACACTGCTTCGCAGTATGGAGTTCAAAAAGAAGTTGGACAAGCACTCCAAGCAGCCATGAAAGCAGGAGTGGAAAGGAAGGATCTATTTGTCACCTCCAAACTATGGTGCACTGACTTGACCCCTGAGAGGGTTAGACCTGCTCTCAACAATACCCTTCAAGAACTCCAACTTGACTACCTTGATCTTTACTTGATTCATTGGCCATTTCGTCTAAAAGATGGGGCCAGCAGACCCCCAGGACCAGGAGATGTTTTAGAGTTTGACATGGAAGGGGTGTGGAGAGAAATGGAGAAGCTTGTGGAGGAAAAGCTTGTCAGAGACATTGGAATCTGCAATTTCACTCTAGCAAAGCTTGAAAAGCTGCTGAGCATTGCTCAAATAATGCCTTCTGTCTGCCAGATGGAAATGCATCCTGGATGGAGAAATGATAAGATGCTTGCGGTTTGCAAGAAGAATGGCATCCATGTCACTGCTTACTCTCCACTGGGTTCATCAGACAGTGGGAGGAATCTGACCAAAGATCAAACGGTTGATAGGATAGCTAATAAATCTCACAAGAACCCAGGGCAGGTGCTGGTGAAGTGGGCCATCCAGAGAGGGACAAGTGTCATCCCCAAATCAGTCAAGCCAGATAGGATCATGGAGAATGTCAGTGTCTTCAATTGGGAACTTCCAGCAAAAGATTTTAAGGCCCTTAGCAGCATGCAGGAGCAGAGAAGAGTTCTGGACGGTGAACAGGTCTTTGTGAACAAGAGCGATGGTCCATTTAAGAGTGCGGCGGATTTATGGGACCATGAAGATTAG 966 0.4638 MTQVVKPHEPKTQAFTLASGHTIPAVGLGTWKSGSEAANSVFTAIINAGYRHIDTASQYGVQKEVGQALQAAMKAGVERKDLFVTSKLWCTDLTPERVRPALNNTLQELQLDYLDLYLIHWPFRLKDGASRPPGPGDVLEFDMEGVWREMEKLVEEKLVRDIGICNFTLAKLEKLLSIAQIMPSVCQMEMHPGWRNDKMLAVCKKNGIHVTAYSPLGSSDSGRNLTKDQTVDRIANKSHKNPGQVLVKWAIQRGTSVIPKSVKPDRIMENVSVFNWELPAKDFKALSSMQEQRRVLDGEQVFVNKSDGPFKSAADLWDHED 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g00061 321 Pfam Aldo/keto reductase family 26 289 IPR023210 -
Vimu6g00061 321 Gene3D - 3 321 IPR036812 -
Vimu6g00061 321 SUPERFAMILY NAD(P)-linked oxidoreductase 15 296 IPR036812 -
Vimu6g00061 321 ProSitePatterns Aldo/keto reductase family putative active site signature. 258 273 IPR018170 GO:0016491
Vimu6g00061 321 ProSitePatterns Aldo/keto reductase family signature 1. 49 66 IPR018170 GO:0016491
Vimu6g00061 321 PANTHER ALDO/KETO REDUCTASE 14 291 - -
Vimu6g00061 321 PRINTS Aldo-keto reductase signature 45 69 IPR020471 GO:0016491
Vimu6g00061 321 PRINTS Aldo-keto reductase signature 104 122 IPR020471 GO:0016491
Vimu6g00061 321 PRINTS Aldo-keto reductase signature 225 249 IPR020471 GO:0016491
Vimu6g00061 321 PRINTS Aldo-keto reductase signature 184 213 IPR020471 GO:0016491
Vimu6g00061 321 PRINTS Aldo-keto reductase signature 150 167 IPR020471 GO:0016491
Vimu6g00061 321 ProSitePatterns Aldo/keto reductase family signature 2. 150 167 IPR018170 GO:0016491
Vimu6g00061 321 PIRSF AKR 8 312 IPR020471 GO:0016491
Vimu6g00061 321 FunFam NADPH-dependent codeinone reductase 1-1 12 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g00061 Vimu-Chr6 755295 761952 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g00061 K00002 - gmx:100816064 565.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g00061 6 755295 761952 Vimu6g00061 6 755295 761952 ECH
Vimu6g00061 6 755295 761952 Vimu9g01281 9 20818563 20822073 PCT