Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g01241 ATGAGACATCCTCTTCTGCATAGATTCATCAATGAATTTGCTCTGACTTTTGATGGAAACAAATGGGGGCATAACGGTCCCTACCTTGTTTCAAGAGTAATTAAGAGGCTGAGGATAAGACGCGATTTCAAGTTTACAATTTTTCCTCCTAAGGCCTTTTATCCAGTAGACTGGAACAAGATAACTGGGTTCTTTACAAAACCAAAAATTCAGAGTGAATCAAGATGGGTAGAAGCTAAACTGCTTCAGCTTAGTGGGAAGAAGACTTATGGGATTCATCTATGGAACAAACGTAGTAGCAGATTGACTATTGAAGGAAGCTTCATTAATAGAGTTGTATCAAATTATTTGACCAATAGGTAG 363 0.3774 MRHPLLHRFINEFALTFDGNKWGHNGPYLVSRVIKRLRIRRDFKFTIFPPKAFYPVDWNKITGFFTKPKIQSESRWVEAKLLQLSGKKTYGIHLWNKRSSRLTIEGSFINRVVSNYLTNR 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g01241 120 Pfam Alpha 1,4-glycosyltransferase conserved region 2 104 IPR007652 -
Vimu9g01241 120 SUPERFAMILY Nucleotide-diphospho-sugar transferases 3 108 IPR029044 -
Vimu9g01241 120 PANTHER ALPHA 1,4-GLYCOSYLTRANSFERASE FAMILY PROTEIN 2 115 IPR044789 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g01241 Vimu-Chr9 20279644 20282689 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g01241 3 115 Glycosyltransferase AT1G61050 53.448 4.97e-37 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g01241 K01988 - gmx:100781975 186.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g04447 6 49905769 49910914 Vimu9g01241 9 20279644 20282689 PCT