Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g01176 TTGCAGAATCCAATTCTACCTTTTGATGCTAATGGGATCAACCCACCAACCCTAGAGTCTCACGCCAGCAAGATTAATTCATTCATCTCAAACCAAAAACCACCCACTTCAATTATGGCAGCACCTTCTACTTCCAATTACTTCAGGGTCTTCACTTTCTCCATTTTATTCTTCAAAACCCTAGCATTTGACCCGATTCCTTTGTTTTCTTACGCTGAATTTGGTAAAGATCTGAAATTTAAGCCCAACGTGGCCCTTTTTGGTAATGCAAAAGTTGTCAATGACGGTTCTGGGATTTATTTCTCTGGTTCTGGGAGTTCAGACACTGGGAGAGTCATGTACAAGAAACCCATCAAGCTTTTTCAAGGTAAGCCAAGACAATTAGTGTCAATTTCTACTTACTTTGCATTTTCAATCTCCCTGGACATGGGAGGTGGTTTGGCTTTTGTTATGGTTCCAAAGGGTTCTGCAAGTGATGTGTTTTATCAAAGTTCTTCTGGGTTAAATGATAGAAATTTTGAAGTTATTGGTGTTGAGTTTAGTGCTTCAGGGGGTGGTAGAAATGGGGTTTCTTCTGCTTGTAATGTGACCATTAATGTTGGTGGTTCAGTTGTTGCTAAAATAAGTAACAAATTGGCTTTAACAAGTGGAGAAAAGTTGCATGCTTGGATTGACTATGAAGCTAGTTCTAGGCGCTTAGAAGTTAGATTGAGTCAGCATGGAAAATCAAGGCCTTCTGTTCCACTGCTATGGCGCTCAATTGACTTGTCAAATGTCTTGAAGGAGAATGAAATGTTTGCGGGTTTTAGTTCTGTGAAGGGGAATGATTCTCAAGCATGTTTTCTCTATTCATGGAGCTTTGTTCTGAGGAGTTTTCCACATTCAATGCATTCAGAGCCTCTGGATCCAAAGGTGTTTGTTAAAAGCACTGAAAGTCCGGTGGTTAAACAAAGGAGTGATTGCTTCTTAAGAGTTCTTGCTGCAATGATATTTGGTACTGGATGTGGAGCTTTGACAGCCTTTATCGTGCTTTACTTATGGACCATCTTTGGTAATAAACGTGCAGTAGTGCCAGAGGAGACTGTTATGCAACCTGTAGATGTTGAGTATAGGAAAGTCAAAATTGTTGTAGATAAAACCATCCAAGACAGTAAGAATTAG 1161 0.3988 MQNPILPFDANGINPPTLESHASKINSFISNQKPPTSIMAAPSTSNYFRVFTFSILFFKTLAFDPIPLFSYAEFGKDLKFKPNVALFGNAKVVNDGSGIYFSGSGSSDTGRVMYKKPIKLFQGKPRQLVSISTYFAFSISLDMGGGLAFVMVPKGSASDVFYQSSSGLNDRNFEVIGVEFSASGGGRNGVSSACNVTINVGGSVVAKISNKLALTSGEKLHAWIDYEASSRRLEVRLSQHGKSRPSVPLLWRSIDLSNVLKENEMFAGFSSVKGNDSQACFLYSWSFVLRSFPHSMHSEPLDPKVFVKSTESPVVKQRSDCFLRVLAAMIFGTGCGALTAFIVLYLWTIFGNKRAVVPEETVMQPVDVEYRKVKIVVDKTIQDSKN 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g01176 386 Gene3D - 68 289 - -
Vimu9g01176 386 Pfam Legume lectin domain 69 297 IPR001220 GO:0030246
Vimu9g01176 386 PANTHER CONCANAVALIN A-LIKE LECTIN FAMILY PROTEIN 62 368 - -
Vimu9g01176 386 SUPERFAMILY Concanavalin A-like lectins/glucanases 68 287 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g01176 Vimu-Chr9 19426345 19427575 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g01176 83 287 Receptor kinase-like Gene Family AT2G29220 28.194 1.83e-14 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g01176 - - ccaj:109799551 562.762
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g04357 6 47901309 47904132 Vimu9g01176 9 19426345 19427575 PCT