Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g04357 ATGCCCACTTCAATTATGGCACCATTTTCCATTTCCCATCACTTCGCCGCCTTCGTCTTCCTCGTCTTCTTCCTCAAAACCCAAGCTTTTGATCCAGTTTCTTCCTTTTCTTTCACAGATTTTGAGAAAGATCCTGAGTTCAAGTCAAGTGTGGAGCTTTACGGCAATGCAAAAGTTATCAATGAGGGTGCTGAAGTCCTTCTTTCTGGGAATGATGGGAGAGTCATGTACAAGAAGCCCATCAAGCTTCTCCTTGGTGGAGCCAGGGAATTGGTCTCATTTTCAACCTACGTTGGGTTTTCAATGTCCTTGGATAGTGGGAAGGGCAGCTTGGCTTTTGTTATGGTTCCAAGTGGTGTTGAAGGTGAGGTTTTTCGTAATAGTTCATATGGGTTTTCTTTTGGATTGAAGGAAAAGGATTTTAAGATTGTTGGTGTTCAGTTTAGTGTTGAGGGTAGGAATGGGAGTTCTGGTAGTTGTATTGTGTCCATTAATGTTGGTAGTTCTGTTCCTGTTAAGACAATCAATGCCTCATCTGTCATTATGGGTCTAAAAAGTGAAGGGAAATTGCATGCTTGGATTGATTATGAAGCGAGTTCAAAGCGGCTAGAAGTTAGATTGAATCACTACGGTCAATCAAGGCCATCTGATCCATTGCTTTGGCATTCAATTGACTTGTCGAATGTTTGGGGTACTGAAGAGATGTATGCAGGATTTAGTACACTGAAAGGGAACATTTCTCAAGCATCCTTTCTCTATTCATGGAGCTTTATTGTGAGGCACTTTCCACACTGGATGCATTCTGAGCCTCTGGATCCAAAGGTCCTTTCTAAGAACGCAGAAACTCCTGCAGTGAAATCTAGGAGTGATTGCCTTTTGAGGATTCTTGCTGCAATGATATTTGGTGCTGGATGTGGGGCATTGACTGCATTCATTGTGCTGTATTTGTGGACCATCTTTGGTAATAAACGACCAGTGGTGCCGGAGGAGTATGCAATGCAGCCTGTAGATTTTGAGTACAAGAAAGTGGACATTGTTGTAGATAAAACCATCAAAGATGCTAAGGAGTAG 1071 0.4239 MPTSIMAPFSISHHFAAFVFLVFFLKTQAFDPVSSFSFTDFEKDPEFKSSVELYGNAKVINEGAEVLLSGNDGRVMYKKPIKLLLGGARELVSFSTYVGFSMSLDSGKGSLAFVMVPSGVEGEVFRNSSYGFSFGLKEKDFKIVGVQFSVEGRNGSSGSCIVSINVGSSVPVKTINASSVIMGLKSEGKLHAWIDYEASSKRLEVRLNHYGQSRPSDPLLWHSIDLSNVWGTEEMYAGFSTLKGNISQASFLYSWSFIVRHFPHWMHSEPLDPKVLSKNAETPAVKSRSDCLLRILAAMIFGAGCGALTAFIVLYLWTIFGNKRPVVPEEYAMQPVDFEYKKVDIVVDKTIKDAKE 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g04357 356 SUPERFAMILY Concanavalin A-like lectins/glucanases 35 264 IPR013320 -
Vimu6g04357 356 Gene3D - 33 262 - -
Vimu6g04357 356 CDD lectin_legume_LecRK_Arcelin_ConA 35 257 IPR001220 GO:0030246
Vimu6g04357 356 PANTHER CONCANAVALIN A-LIKE LECTIN FAMILY PROTEIN 20 332 - -
Vimu6g04357 356 Pfam Legume lectin domain 34 268 IPR001220 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g04357 Vimu-Chr6 47901309 47904132 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g04357 33 257 Receptor kinase-like Gene Family AT3G55550 28.216 1.06e-12 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g04357 - - gmx:100800406 609.757
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g04357 6 47901309 47904132 Vimu9g01176 9 19426345 19427575 PCT