Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g01002 AAACTACTTGTCAATAAAACTGGTTTAGAGCCTGAAGAGCAACGACTTTTCTTCAGAGGGATAGAAAAAGGTGATAATCAGCATTTGCACCGCGAAGGTGTAAAGGACAAGTCAAAGATTTTACTTTTGGAGGGAAATGCTAGCAAAGAGAAGAAACTTGAGGAAACCAGAAAACAAAATGAGATGTCTAAAGCTTTTGAGGCTATTGCTGGTGTTAGAGCTGAGGTGGACAAGCTCTCAAATAAGGTAACTGCCATAGAAGTAGCTATAAATGGTGGGAATAAAGCTGCTGAGAAAGAGTTTCTTGTGTTGACAGAGTTGCTTATGAGTCAATTGCTAAAACTGGACGGTATTGATGCTGAAGGTGAAGCGAAGTTGCAGAGAAAAGCTGAGGTGCGTCGTGTGCAGACCATAGTGGATAAATTAGATTCTCTAAAGGCAAGAAACTCCAATCCTTTTATCAACAATAGCAACGCTGTCAAGGTAACAACCCAATGGGAAACCTTTGACTCTGGAATGGAAAGCTCGGGTACCCGATCAGATAACTCACCTTCAACAGAAATATCTCAAGATTGGGAGCGATTTGAGTAG 591 0.4112 KLLVNKTGLEPEEQRLFFRGIEKGDNQHLHREGVKDKSKILLLEGNASKEKKLEETRKQNEMSKAFEAIAGVRAEVDKLSNKVTAIEVAINGGNKAAEKEFLVLTELLMSQLLKLDGIDAEGEAKLQRKAEVRRVQTIVDKLDSLKARNSNPFINNSNAVKVTTQWETFDSGMESSGTRSDNSPSTEISQDWERFE 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g01002 196 MobiDBLite consensus disorder prediction 170 190 - -
Vimu9g01002 196 Pfam BAG domain 69 144 IPR003103 GO:0051087
Vimu9g01002 196 ProSiteProfiles BAG domain profile. 68 146 IPR003103 GO:0051087
Vimu9g01002 196 Gene3D BAG domain 46 150 IPR036533 GO:0051087
Vimu9g01002 196 MobiDBLite consensus disorder prediction 170 196 - -
Vimu9g01002 196 SUPERFAMILY BAG domain 46 150 IPR036533 GO:0051087
Vimu9g01002 196 PANTHER BCL2-ASSOCIATED ATHANOGENE 1 170 IPR039773 GO:0051087
Vimu9g01002 196 Gene3D - 1 44 - -
Vimu9g01002 196 SMART BAG_1 68 146 IPR003103 GO:0051087
Vimu9g01002 196 ProSiteProfiles Ubiquitin domain profile. 1 43 IPR000626 GO:0005515
Vimu9g01002 196 SUPERFAMILY Ubiquitin-like 2 49 IPR029071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g01002 Vimu-Chr9 16836148 16842196 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g01002 - - gmx:100799120 330.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g04563 6 51412169 51415433 Vimu9g01002 9 16836148 16842196 PCT