Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00991 ATGAGAACTGAGCTAGTCTCACAACTTCTGGCCATGGCATTGTTTTGGCTGTGCCTCTGTAACAACCTTTTTCTGGTTTCTGGCCTTTGTCTTCATGATCAGAGGTCATTGCTGCTCCAACTCAAGAACAACCTGACTTTCACCATTGAAACAAGTAGCAAACTCAAGTCATGGAATCCAAATAATGATTGTTGCGGTTGGATAGGGGTAAAGTGTGACAAGGAGGGTCATGTTATTGCTCTTGACCTCAGTGGTGAATCAATCACTGGTGGTTTTGGCAATTCAAGTAGCCTTTTCAGTCTTCAACATCTCCACAGATTGAATTTCGCTTATAACGATTTCAATTCTGTCATACCATCTGCATTTAAGAGGTTGGAAAATTTGACTTATCTGAATCTATCATGTGCGGGCTTTCTGGGTCAGATTCCAATAGAGATTTCTCAAATGACTAGGTTGGTTACTCTTGATCTCTCTTCTCTTCTCTGTTCATCTGGGCAAGAGCTGAACCTGGGGAACCCAAATCTACGAAAGCTTGTACAAAATCTCACCAGTATTAGGCAACTGTGTTTGGATGGTGTAAGTATATCAGCTGCAGGACATGAATGGTCCAGCGCTTTGATGTCACTGCATGACCTGCAAGAAGTTCGCATGTCACTGTGCAATCTCTCAGGACCCCTGGATCCTTCCCTTGCAAGACGTGACAATCTATCGATCATTGTTCTTGATTGGAACGATTTATCATCCGCAGTGCCAGAAACATTTGCCAATTTCAAAATGCTGACCATCCTAAGTCTTTCTGCTTGTCAGTTGACTGGAACATTTCCACAGAAGATATTCAACATCGGAACATTGTCAGTTGTTGACCTTTCCTTCAACATCAATCTCCAAGGTTTGTTCCCAGAATTTCCACCAGGATCTCTTCACACCTTAAGAGTGGCTAACACAAGCTTCTCTGGAGCAGTTCCACACTCTATTGGTAACATGAGGAACTTAACTGAATTAAATTTTTGTTCTTGTCGATTTAACGGAACGCTTCCCAATTCACTGTCAAACCTCACAGAACTCAGTTACCTGGACTTGTCATTCAACAACTTCACAGGTAGAATTCCATCATTTAATATGGCCAAGAAACTTACGCTCTTAGACCTTTCTTATAATGGTTTGAGTGGTTCAATTCCATCGTCTCACTTTGAAGGACTGAACAATCTTGTTACCATTGATCTCAGTAATAACTCCATTAGTGGGAGCATTCCTTCATCCCTTTTTACACTCCCCCACCTGAGAAGTATTATATTTTCCCATAATCACTTTGCTCAACTAGACGAATTCACAAATGTTTCTTTTTCGAAATTAGACATCCTCCATTTAAGTAGCAATAATCTATCAGGGTCTTTTCCAACATCTGTATACCAACTCAGTAGACTCTCAGTCCTCGAACTTTCTTCAAACAAGTTAAATGGGACAGTGCATCTAAATAAGCTTTCGGAGCTCAGAAATTTAACTACTCTGGATCTTTCATACAACAACTTATCAGTCGATGTGAATGTTGCAAATGCTGACCCATCTTGCTTTCCCAGCATTTTCGATCTAAGGTTGGCATCATGCAACTTGAAAACTTTCCCTGCTTTCTTGAGAAATCACTCAACAATATCCTCTCTAGATCTTTCGGATAACCATATCCAAGGAATAGTACCCAACTGGATTTGGAAACTACCGAATCTTGCAAAACTTAATATTTCTCATAATTTGTTGACTCATTTGGAAGGACCTTTTCAGAATTTTTCTTCCGAGTTGGAAGAGCTTGACCTTCATCATAATAAACTTCAGGGGCCAATACCATTTTTTCCCGAAAAAGGATTCTATTTGGATTTTTCAGACAACAGATTTAACTCTGTTATCCCACGAGACATTGGTAATTACCTGTCTATAACATATTTTTTCTCTCTCTCAAACAATACTTTGAGTGGCACTATACCTGATTCCCTCTGCAATTCTTCAAATCTTGGATTTCTCGATCTTTCCAATAACAACATTTCTGGAACAATTCCTTCGTGTTTGATGAAAATGAGTAAGACCCTTGAGTTATTAAATCTTAGAAAGAATAGTCTCATGGGCCCCGTCCCAGATAAGTTTTCAGCTGTCTGTGCTCTAAGGACTCTGAATCTACGTCAAAATAAATTAGATGGAAAGATTCCGAAATCTCTTTCTGATTGCACATCATTGGAAGTATTAGACCTTGGAAAAAATAAAATTATGGATGTCTTTCCGTGCTTGTTGAGGAAGATATCCACACTCCGGGTCTTAGTCTTGAGAGAAAATAATTTACATGGTCACATTGGATGTGCAAACACCACTGCCACATGGCGCGTACTTCAAATAGTTGATCTAGCCTTTAACAATTTCAGGGGCAAGCTACCTGAAACCTTTTTCACAAGCTGGGAGGCAATGATGTCTGAAGAAAACCAAGATGAATCGGAGGAAAAAAAAATCCGCCATAAGATCTATCAATATGGCCACCTATATTATGAGGATTCAGTGACAGTTACAATAAAAGGTCAACGGATGGATCTGATTAAGATTCTAACTTTCTTCACTTCGATCGACTTCTCATCCAACCATTTTGAAGGGGAAATACCAAATGAGTTATTTGACTTTAAGGCACTCCATACACTTAACTTGTCAAATAATGCTTTTTCTGGCAAAATTCCACAATCAATTAGAAATCTGAAGGAGCTTGAGTCCTTAGACTTATCAAACAACTTACTGGAAGGAAATATTCCCACAGAAATCGCAACTTTATCCTTCCTCTCAGTCCTGGACCTCTCCTTTAATCATTTGGTGGGAAAGATCCCAACAGGCACCCAACTTCAGTCATTTCCAGCTTCTTCCTTTCAAGGAAATGATGGGCTCTACGGTCCTCCATTGACAGAAGAGCTAGATGGTACAGAGCCAGGGGTGTTACAAGAACACCAAACAACAGTTTCTACCATTGACTGGAATTTTATTAGTGTGGAAGTGGGACTGATATTTGGCCATGGTATGGTTTTTGGCCCACTCTTGTTTTGGAAGCAATGGAGAACATGCCTGCTTGTATACGATTACAAGGCACATTTTGACAGCATAGATAGCAGAACTTCACTTGACTCAAGATTCTCAACATGGGTGGTCCCCCCTACATCATGGGATGTCCAAAATCTTGTTCAGACTCGCGTAATCGTTTACAGCCTGCTTGTAAACGATTACAAGGCACATTTTCACAGCAGAGGTACCAGAACTTCAGCTGTGGTCCCCTATGTTTTAACTGGTGGCTTCTTCAGTTAA 3321 0.4014 MRTELVSQLLAMALFWLCLCNNLFLVSGLCLHDQRSLLLQLKNNLTFTIETSSKLKSWNPNNDCCGWIGVKCDKEGHVIALDLSGESITGGFGNSSSLFSLQHLHRLNFAYNDFNSVIPSAFKRLENLTYLNLSCAGFLGQIPIEISQMTRLVTLDLSSLLCSSGQELNLGNPNLRKLVQNLTSIRQLCLDGVSISAAGHEWSSALMSLHDLQEVRMSLCNLSGPLDPSLARRDNLSIIVLDWNDLSSAVPETFANFKMLTILSLSACQLTGTFPQKIFNIGTLSVVDLSFNINLQGLFPEFPPGSLHTLRVANTSFSGAVPHSIGNMRNLTELNFCSCRFNGTLPNSLSNLTELSYLDLSFNNFTGRIPSFNMAKKLTLLDLSYNGLSGSIPSSHFEGLNNLVTIDLSNNSISGSIPSSLFTLPHLRSIIFSHNHFAQLDEFTNVSFSKLDILHLSSNNLSGSFPTSVYQLSRLSVLELSSNKLNGTVHLNKLSELRNLTTLDLSYNNLSVDVNVANADPSCFPSIFDLRLASCNLKTFPAFLRNHSTISSLDLSDNHIQGIVPNWIWKLPNLAKLNISHNLLTHLEGPFQNFSSELEELDLHHNKLQGPIPFFPEKGFYLDFSDNRFNSVIPRDIGNYLSITYFFSLSNNTLSGTIPDSLCNSSNLGFLDLSNNNISGTIPSCLMKMSKTLELLNLRKNSLMGPVPDKFSAVCALRTLNLRQNKLDGKIPKSLSDCTSLEVLDLGKNKIMDVFPCLLRKISTLRVLVLRENNLHGHIGCANTTATWRVLQIVDLAFNNFRGKLPETFFTSWEAMMSEENQDESEEKKIRHKIYQYGHLYYEDSVTVTIKGQRMDLIKILTFFTSIDFSSNHFEGEIPNELFDFKALHTLNLSNNAFSGKIPQSIRNLKELESLDLSNNLLEGNIPTEIATLSFLSVLDLSFNHLVGKIPTGTQLQSFPASSFQGNDGLYGPPLTEELDGTEPGVLQEHQTTVSTIDWNFISVEVGLIFGHGMVFGPLLFWKQWRTCLLVYDYKAHFDSIDSRTSLDSRFSTWVVPPTSWDVQNLVQTRVIVYSLLVNDYKAHFHSRGTRTSAVVPYVLTGGFFS 1106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00991 1106 SUPERFAMILY L domain-like 55 276 - -
Vimu9g00991 1106 Gene3D Ribonuclease Inhibitor 518 618 IPR032675 -
Vimu9g00991 1106 SMART LRR_typ_2 909 932 IPR003591 -
Vimu9g00991 1106 SMART LRR_typ_2 714 738 IPR003591 -
Vimu9g00991 1106 SMART LRR_typ_2 448 472 IPR003591 -
Vimu9g00991 1106 SMART LRR_typ_2 571 593 IPR003591 -
Vimu9g00991 1106 SMART LRR_typ_2 352 374 IPR003591 -
Vimu9g00991 1106 SMART LRR_typ_2 400 424 IPR003591 -
Vimu9g00991 1106 SMART LRR_typ_2 101 124 IPR003591 -
Vimu9g00991 1106 SMART LRR_typ_2 497 520 IPR003591 -
Vimu9g00991 1106 SMART LRR_typ_2 739 761 IPR003591 -
Vimu9g00991 1106 SMART LRR_typ_2 933 966 IPR003591 -
Vimu9g00991 1106 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 856 978 - -
Vimu9g00991 1106 Pfam Leucine rich repeat N-terminal domain 32 73 IPR013210 -
Vimu9g00991 1106 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1-LIKE-RELATED 362 979 IPR046956 -
Vimu9g00991 1106 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 615 821 - -
Vimu9g00991 1106 Gene3D Ribonuclease Inhibitor 418 517 IPR032675 -
Vimu9g00991 1106 SUPERFAMILY L domain-like 622 975 - -
Vimu9g00991 1106 Gene3D Ribonuclease Inhibitor 28 178 IPR032675 -
Vimu9g00991 1106 Gene3D Ribonuclease Inhibitor 619 983 IPR032675 -
Vimu9g00991 1106 Gene3D Ribonuclease Inhibitor 180 304 IPR032675 -
Vimu9g00991 1106 Gene3D Ribonuclease Inhibitor 305 417 IPR032675 -
Vimu9g00991 1106 SMART LRR_sd22_2 472 496 - -
Vimu9g00991 1106 SMART LRR_sd22_2 497 518 - -
Vimu9g00991 1106 SMART LRR_sd22_2 375 402 - -
Vimu9g00991 1106 SMART LRR_sd22_2 738 767 - -
Vimu9g00991 1106 SMART LRR_sd22_2 149 170 - -
Vimu9g00991 1106 SMART LRR_sd22_2 909 935 - -
Vimu9g00991 1106 SMART LRR_sd22_2 595 624 - -
Vimu9g00991 1106 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 304 520 - -
Vimu9g00991 1106 PRINTS Leucine-rich repeat signature 497 510 - -
Vimu9g00991 1106 PRINTS Leucine-rich repeat signature 378 391 - -
Vimu9g00991 1106 SUPERFAMILY RNI-like 201 582 - -
Vimu9g00991 1106 ProSiteProfiles Leucine-rich repeat profile. 402 424 IPR001611 GO:0005515
Vimu9g00991 1106 Pfam Leucine rich repeat 692 751 IPR001611 GO:0005515
Vimu9g00991 1106 Pfam Leucine rich repeat 887 946 IPR001611 GO:0005515
Vimu9g00991 1106 Pfam Leucine rich repeat 377 437 IPR001611 GO:0005515
Vimu9g00991 1106 Pfam Leucine rich repeat 550 608 IPR001611 GO:0005515
Vimu9g00991 1106 Pfam Leucine rich repeat 450 510 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00991 Vimu-Chr9 16622027 16625955 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g00991 29 1017 Receptor kinase-like Gene Family AT1G47890 36.119 7.04e-151 475
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00991 - - gmx:100806632 1354.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g04560 6 51375860 51379279 Vimu9g00991 9 16622027 16625955 PCT