Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00920 ATGGCTGCTCTCAAATTTGCAAGCGTGGTTGCGGTGATGTGCATGGTGCTAGTGACTGCACCCTTCACACATTCGATCACGTGCTCCGAAGTGGCCCGTGCCATATACCCATGCCTCAGATACCTTCGGGGTCCTGACGGAGTGCCACCGCCGCAATGCTGCGCAGGAGTGAGGAGCCTCAACAGCGCTGCGAGGACCACCGCCGACCGCCGGACCGCGTGCAATTGCCTGAAATCCTCTGCTGCTTCCATTTCTGGGCTTAATTTCAGTACCGCAGCTTCACTCCCAGGAAGATGTAGAGTGAAGACCCCCTACCAGATTAGCCGTTCCACCAACTGCAACGGGTATGTTCATATATATATATATATATATAGTTTGCTAAATTATATAACACTTTTAATGTATTTTACTTGA 414 0.5048 MAALKFASVVAVMCMVLVTAPFTHSITCSEVARAIYPCLRYLRGPDGVPPPQCCAGVRSLNSAARTTADRRTACNCLKSSAASISGLNFSTAASLPGRCRVKTPYQISRSTNCNGYVHIYIYIYSLLNYITLLMYFT 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00920 137 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 26 114 IPR036312 -
Vimu9g00920 137 CDD nsLTP1 26 114 - -
Vimu9g00920 137 Gene3D - 25 116 IPR036312 -
Vimu9g00920 137 Pfam Protease inhibitor/seed storage/LTP family 28 113 IPR016140 -
Vimu9g00920 137 PRINTS Plant phospholipid transfer protein signature 69 84 IPR000528 GO:0006869|GO:0008289
Vimu9g00920 137 PRINTS Plant phospholipid transfer protein signature 86 103 IPR000528 GO:0006869|GO:0008289
Vimu9g00920 137 PRINTS Plant phospholipid transfer protein signature 104 115 IPR000528 GO:0006869|GO:0008289
Vimu9g00920 137 PRINTS Plant phospholipid transfer protein signature 27 43 IPR000528 GO:0006869|GO:0008289
Vimu9g00920 137 PRINTS Plant phospholipid transfer protein signature 48 62 IPR000528 GO:0006869|GO:0008289
Vimu9g00920 137 SMART aai_6 28 113 IPR016140 -
Vimu9g00920 137 PANTHER NON-SPECIFIC LIPID-TRANSFER PROTEIN 2-RELATED 7 114 IPR000528 GO:0006869|GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00920 Vimu-Chr9 15136419 15136832 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g00920 6 114 Acyl Lipid Metabolism Gene Families AT5G59320 51.376 1.51e-30 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00920 - - gmx:100775184 156.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g00133 6 1722315 1722746 Vimu9g00920 9 15136419 15136832 PCT