Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00864 ATGGCCACCCAATTCTTCATTCTCACCCTTCTCATCTTCTGCAGCACCCTCACTTTCACCACAGCCCAAGACACAAACACAGGTTTCGTAGGTTCACCAGACCCCAAGGCATTAGGCTTAAAGGAAAAACTCAGTTTTAGCCATTTCCGCTTCTACTTCCACGAGAGGTTCGCCGGAAGCAACCCCACCTCCGTCTTTGTGGTTCCGCCTGTACCCAAGTACAACTCCAGCACCTTATTCGGCACGGTGGGGTTCATGGACACCTCCTTGACAGTGGGACCGGAGCCAACCTCCAAGGTGGTGGGAAGAATCGAGGGTTTGGTTGCAGGAACGTCGCAGAGGGAGTTTATCTTGTTGGTGGTTCTGAACTTCGTGTTAACCGAAGGGAAGTACAATGGGAGCACCATCACTGTGTTGGGGAGGAACCGCATCAACCAAAACATCAGGGAGATTCCGGTAATTGGAGGCACTGGAGTGTTCAGATTTGCCACGGGATATGCAGAGACTAATACCATTTTTCTTGATCCCAAAACGAGGTCTACCATTGAATACAACATTTATGTTTCCCACTACTATTGA 579 0.4957 MATQFFILTLLIFCSTLTFTTAQDTNTGFVGSPDPKALGLKEKLSFSHFRFYFHERFAGSNPTSVFVVPPVPKYNSSTLFGTVGFMDTSLTVGPEPTSKVVGRIEGLVAGTSQREFILLVVLNFVLTEGKYNGSTITVLGRNRINQNIREIPVIGGTGVFRFATGYAETNTIFLDPKTRSTIEYNIYVSHYY 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00864 192 PANTHER NUCLEOPORIN-RELATED 36 187 IPR004265 -
Vimu9g00864 192 Gene3D - 37 189 IPR044859 -
Vimu9g00864 192 Pfam Dirigent-like protein 47 188 IPR004265 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00864 Vimu-Chr9 13432473 13433470 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00864 - - vra:106755110 369.007
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g00056 6 705979 718878 Vimu9g00864 9 13432473 13433470 PCT