Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00853 ATGAATACAGGGAGAAGAACACAAACTTTTAGAATCAGTGGGGCTGTGCCTTTTTATCCAAATTTAGTGGTCAATTCTGTAGGTGGCAGAAATTTGGAGAAGTATCAGCTTGGTGGGGTTATATTTGGTTGTAAGAACAACACAATGAAAGAATGCCAATCAAAACAACTCTTCGGTTTACCAGCAAACCACTTTTCCTATGTGAAGAACATTGATCCTGGCCTTCCTATTTTTCTGTTCAACTATAGTGATAGGAAGCTCCATGGAATTTTTGAGGCATCTAGCAAAGGGAAAATGTACATTGACCCTTACGCATGGATTGATGAAAATTCAGAATTGGATAGAACACAATATCCTGCACAGGTGAAAGTTCGCGTGCGTCTTCAGTGCCAGCCACTATCTGAAGATATATTTGCACCAGTAATTGAAGGCAACTACTACACCAATAACCATTTCTGGTTTGAATTAGACCATAAACAAGCAAACAAACTTACCTCATTGCTAGCTTCTTTAGCATTTGCATCTGGTTGTAATTTGAAGTGGAAAACTGTGTCTCCATCTTTTCCATCAAAAGTAGGTGAAGCATTTGAAATACCTGAGTCTGAGTCAGAGGCACAACATTTTACAAGACCATGTAAGAGAACATATTCCACTGAAGTTACTTACTCTTTAGATGGAGACATCAGATCATTGGATACTCAAGCAGTAGTGGAGGAGGTGAATGAGAATGAGCTGAACCTTGTATATGAGAAGCTAAAGAAAATTGCTCTTGGTCATGAAAGTCAAGACCTCTCACTGTCAGACAATGTGAATGACACTCCTGATGAGAATGATGCATGCACAGTGGAAAATGATCAGAAGGAGAATGATACTCTTCATGAGAATGATGTATACATTGTGGAATATGATGAGAAGGAGAATGGCACTCTTGATGAGAATGATGCGTACATTGTGGAAAGGGGATGTCATGAGGTGCCAGAATGTTTAGAGAAGGAAGAAAATTCAAGTAATCCAATTGAGCATAAATACTCCATTGAAAAGTTGATACAAGAAGTTGAAGAACTCATGACTTTCAAGCAAATGCAAATACAAAACAGTTGTCACCTTGAGCAAAAGCTGACACATGTTGAGAAGACAGTTATTCGGTCACATGATGAGCAACATGTAGACCCTGAAGAGACATTATTTATAAAAGTGTTTTTTGATGGAGAATGGTGGTTATCAACTATTGATTTATATTGGTCTTTCCAGAAGTTTATCAGTAGTTCTTTAACCAAACAAATATTTTCTGTTGATGGTGTTTATGGCATTGACAACTTTGTAGTTACTAAGGTGCTTGATTTAGATATTGGGAGGTGGATCTCTCCTGGTTCGAAGCTAGACAAGATAGATCATCTTGTGGAGCTAAAGGTGTTGTGGTGA 1422 0.3812 MNTGRRTQTFRISGAVPFYPNLVVNSVGGRNLEKYQLGGVIFGCKNNTMKECQSKQLFGLPANHFSYVKNIDPGLPIFLFNYSDRKLHGIFEASSKGKMYIDPYAWIDENSELDRTQYPAQVKVRVRLQCQPLSEDIFAPVIEGNYYTNNHFWFELDHKQANKLTSLLASLAFASGCNLKWKTVSPSFPSKVGEAFEIPESESEAQHFTRPCKRTYSTEVTYSLDGDIRSLDTQAVVEEVNENELNLVYEKLKKIALGHESQDLSLSDNVNDTPDENDACTVENDQKENDTLHENDVYIVEYDEKENGTLDENDAYIVERGCHEVPECLEKEENSSNPIEHKYSIEKLIQEVEELMTFKQMQIQNSCHLEQKLTHVEKTVIRSHDEQHVDPEETLFIKVFFDGEWWLSTIDLYWSFQKFISSSLTKQIFSVDGVYGIDNFVVTKVLDLDIGRWISPGSKLDKIDHLVELKVLW 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00853 473 PANTHER - 27 421 IPR044832 GO:0034976
Vimu9g00853 473 SMART dcd 35 170 IPR013989 -
Vimu9g00853 473 Pfam Development and cell death domain 38 167 IPR013989 -
Vimu9g00853 473 ProSiteProfiles DCD domain profile. 35 170 IPR013989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00853 Vimu-Chr9 13144122 13151727 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00853 - - var:108346607 743.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g00052 6 648088 654149 Vimu9g00853 9 13144122 13151727 PCT