Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00789 ATGGTAGGACCAGTGAGGCCTCAATTTGTGTTGTTTGGTTCATCCATAGTTGAGCTGAGTTATAGTTGTGAAGGTTGGGGAGCTACCCTTGCCAACTTGTATGCTCGCAAGGCAGATGTAATTTTGAGAGGATATTGCGGTTGGAATACAAGACGTGCTCTGCAAGCTCTGGATAAAATATTTCCCAAGGATGCCACTGATCAACCATCATTGGTAATTGTGTACTTTGGTGGCAATGATTCTATGCATCCACATCCAACAGCCCATAGTCCTCATGTACCCCTCCAAGAATACATTGAAAATATGAGGAAGATTGCTATCCATCTAATGAGCCTTTCAAAGAAGACTCGCTTAATATTTCTCAGTTCCCCTCCCATCAATGAGGTGCAAATGCATGAAATGCTCAGTGATCTACTGGGGCCATTAAAAAGGACAAATGAATCCTGTCGATTATACTCAGAAGCATGTTTGGAGCTGTGCCGTGAGATGAATGTGAAAGCCATTGATCTCTGGTCTGCACTCCAGCAAAGGCATGACTGGGATGGAATTCATTTGTCACATGAGGGAAACAAAATAGTGGCAAAAGAGATATTTAAGGTCCTCAGAGAAGCAGACTGGGAACCTAGTCTGCACTGGAACTCAATGCCAACAGAGTTTGCAGAAGATTTCCCTTTATGA 678 0.4322 MVGPVRPQFVLFGSSIVELSYSCEGWGATLANLYARKADVILRGYCGWNTRRALQALDKIFPKDATDQPSLVIVYFGGNDSMHPHPTAHSPHVPLQEYIENMRKIAIHLMSLSKKTRLIFLSSPPINEVQMHEMLSDLLGPLKRTNESCRLYSEACLELCREMNVKAIDLWSALQQRHDWDGIHLSHEGNKIVAKEIFKVLREADWEPSLHWNSMPTEFAEDFPL 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00789 225 FunFam isoamyl acetate-hydrolyzing esterase 1 homolog 6 225 - -
Vimu9g00789 225 Pfam GDSL-like Lipase/Acylhydrolase family 11 192 IPR013830 -
Vimu9g00789 225 PANTHER ISOAMYL ACETATE-HYDROLYZING ESTERASE 1 4 222 IPR045136 -
Vimu9g00789 225 SUPERFAMILY SGNH hydrolase 6 201 - -
Vimu9g00789 225 CDD Isoamyl_acetate_hydrolase_like 8 201 - -
Vimu9g00789 225 Gene3D SGNH hydrolase 6 223 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00789 Vimu-Chr9 12321424 12323832 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00789 K23978 - gmx:100796512 406.757
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g04483 6 50440091 50442153 Vimu9g00789 9 12321424 12323832 PCT