Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g04483 ATGGTTGGCCCCATGAGACCTCAGATTGTGCTCTTTGGCTCCTCTATAGTGCAGTTTAGTTTCGACAATGGTGGTTGGGGTGCTATTCTAGCCGCTTTGTATGCTAGAAAGGCGGACATAGTATTGCGAGGATATTCTGGTTGGAATTCAAGGCAAGCTTTGGATGTTTTGGATGAAGTTTTCCCCAAGGATGCTCCTGTGCAACCATCGTTGGTGATTGTGTACTTTGGTGGTAATGATTCCGTTCACCCTCACCCTTCTGGTCTTGGTCCTCACGTTCCCCTCCAAGAATATCTTGAAAACATGAGAAAGATCGCTAACCATCTTAAGAGCCTTTCAGACCATATTCGCATTATATTTCTCACATCTCCTCCCATCAATGAAGAGCAACTCCGCAAAAAGCTCAGTGCAACGCAGTCAGGAAGAACTAATGAATCCTGCGGAGAATATGCAGACGCACTAATGGAGCTCAGTGAGGAGCTGAACGTCAAGGCCATTAATCTGTGGTCTGCAATTCAGACAAGGGATGACTGGTTAGATGTTAGCTTCACGGATGGAGTTCATCTATCAGCAGAGGGAAGCAAGGTGGTGGTGAAGGAAATACTAAGGGTTCTGAGAGAAGCAGATTGGAAAACCAGTCTGCATTGGATGTCAATGCCAACAGAATATGCAGAAGATTCACCATATTATCCTCCCGCTCCTGATGGAAGAACCACCATTAATGTCTCCTACTGTGTCTCGAGAAGGTCTTTGCAATGGGATCTGTAG 768 0.4583 MVGPMRPQIVLFGSSIVQFSFDNGGWGAILAALYARKADIVLRGYSGWNSRQALDVLDEVFPKDAPVQPSLVIVYFGGNDSVHPHPSGLGPHVPLQEYLENMRKIANHLKSLSDHIRIIFLTSPPINEEQLRKKLSATQSGRTNESCGEYADALMELSEELNVKAINLWSAIQTRDDWLDVSFTDGVHLSAEGSKVVVKEILRVLREADWKTSLHWMSMPTEYAEDSPYYPPAPDGRTTINVSYCVSRRSLQWDL 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g04483 255 CDD Isoamyl_acetate_hydrolase_like 8 205 - -
Vimu6g04483 255 SUPERFAMILY SGNH hydrolase 7 208 - -
Vimu6g04483 255 FunFam isoamyl acetate-hydrolyzing esterase 1 homolog 6 236 - -
Vimu6g04483 255 Pfam GDSL-like Lipase/Acylhydrolase family 11 195 IPR013830 -
Vimu6g04483 255 Gene3D SGNH hydrolase 6 228 IPR036514 -
Vimu6g04483 255 PANTHER ISOAMYL ACETATE-HYDROLYZING ESTERASE 1 4 253 IPR045136 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g04483 Vimu-Chr6 50440091 50442153 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g04483 K23978 - gmx:100792188 469.929
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g04483 6 50440091 50442153 Vimu9g00789 9 12321424 12323832 PCT