Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00552 ATGAAAAGCCCTTGTGATGACAACCTGTTTATTGAAGCAGTACTGGAAGAAGAAGTGAAAAGCCAAGAAGATGGAGCTGAAAAGGGAAAACCCAAAGCCCAGGCGACAGGAACGAAAAACAACAAGTTCCAAATTGACGCTGGTTACCCAGGCAATAGATGCCCGAAGCCTAGGCGACCACAATTGGCGCCCAAGCCTCACATGACCCTCAATTCACGCTTGGGCGAGCTCCCTACGACGCTTGAGCCGCCGAAAGTCCTCTGGGATACGATACTTGGTCTTACCATTTTATATTACTTATGCGACTCGATACACTTGCTGAGTTGCCCCAACAAATATGAGCCTCTTTTGAGTGATTATGGATTTCAGCCACTAGTGAACCCGAATGTTGTAGTGCAGACATTGTTTTCCTTCAAAACCCCAGATTCTACTGAAAAACCAGAAAATCGCGTATCAGACAGAAATCCCTCGTACCAGACAAACAAAAAATCAAAAGCCAAACAAATTACTTGTAATAGTCGCAAAGTGAATGTTATTATGCAAAAAGATCTGTTTTTCTCTTATGTCGTCGATGAGAAACCCAATTCAAAGGCTTTCGCTCATAGCATGAAGATGGAACATCAGAAAAGCTTGGATGAGGGAGCGGAGAAAGTTCAAGTGGTAGAGAAAAAGTTGACTGTGATGGTCGAAATTAGCATCAGATTCAACTATAGTGAGGGAAACAGTGTCATCGGATTTATAAGTGAGGATGGACATTTGGGAGTGAAGGGGCCAAGTGAGGTGTCCGGCGAGAGGGAAAAAACGCGTCCGCATTGGATTCTCGTAAAAGATCTCAACCTCCGCGAAGTAGCCGAGTCGCAACTCGCTCCGAACTCGGGAATGGCTTCTTCGGAAGCCGATTCCCGTCTGAGGCTGGTCCTGGTACCCGCGCTTGAGAAGATAATCAAGAACGCGTCGTGGCGGAAGCATGCCAAACTCACTCATGAGTGCAAATCCGTCATTGAGAGGCTCGGCCACCAGCACCGGCATTTTCCGACTCCGGGATCTCCTTCCGACAATGAACCGGACGTTCCTGGTCCGCTCCATGATGGAGGCCCGTTGGAGTTCTCCTTGGCAGAGTCCGAGTCGATCCTCATGCCTCTCATCAATGCTGCCGGCTCCGGAGTCCTCAAGATCGCCGATCCCGCCATCGACGCCATCCAGAAGCTCATTGCGCATGGCTTCATCCGCGGCGAGGCGGAGCCGGCCTCCGGTGCTGCGGCGCCCGAGGCAAAGCTCCTGTCCAAGCTCATTGAATCTGTCTGCAAATGCCACGATTTCGGCGACGATGCGATGGAGTTGCTGGTTCTCAAGACTTTGCTCTCAGCCGTGACGTCAATTTCGCTCCGTATCCACGGTGATTCCTTGCTTCTCATTGTGCGAACCTGCTACGATATATATCTCGTGAGCAAGAATGTGGTGAATCAGACGACCGCCAAGGCGTCGCTGGTCCAAATGCTGGTGATCGTGTTCCGTCGCATGGAGGCGGATTCCACGACTGTGCCGATTCAACCGATCGTAGTGGCGGAACTGATGGAGCCTGCGGAGAAATCCGATGAAGATAATTCAATGACGCAGTTTGTGCAGGGCTTTATAACGAAGATAATGCATGACATTGACGGCGTTTTGAACCCTACGGCCCCGAGCGGGAAGGTTAATTTGCTAGGTGGGCACGACGGTGCGTTTGAGACCACCACGGTGGAGACTACGAACCCTACTGATTTGTTGGATTCTACTGATAAAGACATGTTGGATGCTAAGTATTGGGAGATTAGTATGTATAAGACGGCTTTAGAGGGACGGAAGGGGGAGCTTGTGGATGGGGAAGTGGTGGAGAGGGACGATGATTTAGAGGTTCAGATTGGGAATAAGTTGAGGAGAGATGCTTTTTTGGTGTTTAGGGCGCTTTGTAAGTTGTCCATGAAGACGCCTCCGAAGGAGGCGGTAGGGGACCCGCAGTTGATGAAGGGGAAGATCGTGGCTCTGGAGTTGCTGAAGATTTTGCTGGAGAATGCTGGTGCTGTGTTCAGGACTAGTGACAGGTATTGCGTTTTACTGAAATTCATTTTCAGACGGAGAATTTTCTGTGTTGAACATAGTAATGAAGGGGTAGACTTCATTGCATTGTCTTGA 2172 0.4959 MKSPCDDNLFIEAVLEEEVKSQEDGAEKGKPKAQATGTKNNKFQIDAGYPGNRCPKPRRPQLAPKPHMTLNSRLGELPTTLEPPKVLWDTILGLTILYYLCDSIHLLSCPNKYEPLLSDYGFQPLVNPNVVVQTLFSFKTPDSTEKPENRVSDRNPSYQTNKKSKAKQITCNSRKVNVIMQKDLFFSYVVDEKPNSKAFAHSMKMEHQKSLDEGAEKVQVVEKKLTVMVEISIRFNYSEGNSVIGFISEDGHLGVKGPSEVSGEREKTRPHWILVKDLNLREVAESQLAPNSGMASSEADSRLRLVLVPALEKIIKNASWRKHAKLTHECKSVIERLGHQHRHFPTPGSPSDNEPDVPGPLHDGGPLEFSLAESESILMPLINAAGSGVLKIADPAIDAIQKLIAHGFIRGEAEPASGAAAPEAKLLSKLIESVCKCHDFGDDAMELLVLKTLLSAVTSISLRIHGDSLLLIVRTCYDIYLVSKNVVNQTTAKASLVQMLVIVFRRMEADSTTVPIQPIVVAELMEPAEKSDEDNSMTQFVQGFITKIMHDIDGVLNPTAPSGKVNLLGGHDGAFETTTVETTNPTDLLDSTDKDMLDAKYWEISMYKTALEGRKGELVDGEVVERDDDLEVQIGNKLRRDAFLVFRALCKLSMKTPPKEAVGDPQLMKGKIVALELLKILLENAGAVFRTSDRYCVLLKFIFRRRIFCVEHSNEGVDFIALS 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00552 723 Pfam Guanine nucleotide exchange factor in Golgi transport N-terminal 639 700 IPR032691 -
Vimu9g00552 723 Pfam Dimerisation and cyclophilin-binding domain of Mon2 299 510 IPR032629 -
Vimu9g00552 723 MobiDBLite consensus disorder prediction 20 42 - -
Vimu9g00552 723 PANTHER GUANYL-NUCLEOTIDE EXCHANGE FACTOR 369 692 - -
Vimu9g00552 723 MobiDBLite consensus disorder prediction 140 166 - -
Vimu9g00552 723 MobiDBLite consensus disorder prediction 341 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00552 Vimu-Chr9 6702169 6708903 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00552 K18442 - vum:124848740 771.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g00286 6 3476501 3494486 Vimu9g00552 9 6702169 6708903 PCT