Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00471 ATGGATGGAAGGTCTTCAGGTGATGGTGTTCCTTTGTGGACTGATAGTCCTGCACATGAAACCCGAAGGCATTTAATAGAGAAGAGGCGGGAAAAGCGTGCTGCTGAGTTGGTAAAAAAGGATAATGTAGTAACTGTAAAACTTGAAAATGCAGCTATTGAACGCTCAAAATATGTTGAATCAGCCGTTCTGGGGAAATACAGCCTTTGGAGGAAAGAAATTGAGAATGAAAATGGTGATTCTACCGTTCGGTTGATGCGAGACCAGATCATTATGGCTAGGGTATATTTAAGCATTGCAAGGATGAAGAACAAGGTCGAACTTTATCAAGAACTAATTTTCCGGCTCAAAGAGAGTCAACGTGCCTTGGGTGACATAGTTTCTGATGCGGATCTACATCACAGTGCACATGGGAAAATAAAGGCTATGGGTCAAATTTTGTCAAAAGCAAGGGAGCTATTGTATGACTGCAAATTGGTCACTGGAAAACTAAGAGCAATGCTACAGACAGCTGATGATCGAGTTAGGAGTTTGAAGAAACAGAGCACATTTCTCAGTCAGTTGGCTGCTAAGACCATACCAAACGGAATCCATTGCTTATCCATGCGCCTTACCATAGATTACTACCTCCTTCCTCCTGAAAAGAGAATGTTACCTCGAAGTGAGAATTTGGAGAATCCCAGTCTTTATCACTATGCACTGTTTTCAGACAATGTCTTGGCTGCCTCTGTTGTTGTCAACTCAACTATTACGAATGCAAAGGATCCTTCAAAGCATGTTTTTCACATTGTTACTGATAAACTAAATTTTGGTGCCATGAACATGTGGTTTCTATTGAACCCTCCTGGAAAAGCTACAGTCCATGTTGAAAATGTTGATGAGTTTAAGTGGTTGAACTCGTCCTACTGCCCAGTCTTGCGGCAGCTCGAATCTTCTACAATGAAAGAGTATTATTTCAAAGCAGGCCATCCAAACACACTTTCTTTCGGTGCTTCCAATCTTAAGTATAGGAATCCAAAATATCTCTCAATGCTCAACCATCTGAGATTCTATCTTCCTCAGGTTTATCCAAAGTTGGATAAAATTTTATTTCTTGATGATGACATTGTTGTTCAGAAGGATTTGACGGGATTATGGGATGTGGATCTTAATGGGAAAGTAAATGGTGCTGTTGAAACGTGTGGTCAGAGCTTTCACAGATTTGACAAATACCTGAACTTCTCTAATCCGCATATTGCAAGAAATTTTGATCCAAATGCCTGTGGTTGGGCATACGGGATGAACATATTTGATCTGAAGGAGTGGAAAAAGAAGGACATCACCGGAATATATCACAAGTGGCAAAATATGAATGAAGACAGGGTGCTGTGGAAGCTGGGGACATTACCTCCAGGGCTAATAACGTTCTATGGGTTGACACATCCGCTAGATAAATCATGGCATGTACTTGGTTTGGGTTATAATCCAAGTGTGGATCGATCAGAGATTGATAATGCAGCAGTTGTACACTACAACGGTAATATGAAGCCATGGTTAGAAATTGCCATGACAAAGTATCGGTCTTACTGGATCAAATATGTCAAGTACAGTCATCCCTATCTTCGGACCTCTTTCCCTACTTTCTCTCACTTTTCTGGCTTTGCTATTTCATCTGCTAGAATGATGATACATGTCTTAGAGCATAGGATGGGTAGGCAGAGCACTGGAAGCAGCACCCTGTTCCCAGTTCCTCGGTGTAGGCCTAAGGAGGATTTCTTATGCAAAGGCATTGATAATCATACTCGTATTGAGCACAGAAACCCATGGATAAATTGGTCAATCAATGCCCTTGACATGGGAACTCATCGGAGGTACACACTTGTGGTGGTTTCTAGACTCTACAAAGCCTAG 1890 0.4143 MDGRSSGDGVPLWTDSPAHETRRHLIEKRREKRAAELVKKDNVVTVKLENAAIERSKYVESAVLGKYSLWRKEIENENGDSTVRLMRDQIIMARVYLSIARMKNKVELYQELIFRLKESQRALGDIVSDADLHHSAHGKIKAMGQILSKARELLYDCKLVTGKLRAMLQTADDRVRSLKKQSTFLSQLAAKTIPNGIHCLSMRLTIDYYLLPPEKRMLPRSENLENPSLYHYALFSDNVLAASVVVNSTITNAKDPSKHVFHIVTDKLNFGAMNMWFLLNPPGKATVHVENVDEFKWLNSSYCPVLRQLESSTMKEYYFKAGHPNTLSFGASNLKYRNPKYLSMLNHLRFYLPQVYPKLDKILFLDDDIVVQKDLTGLWDVDLNGKVNGAVETCGQSFHRFDKYLNFSNPHIARNFDPNACGWAYGMNIFDLKEWKKKDITGIYHKWQNMNEDRVLWKLGTLPPGLITFYGLTHPLDKSWHVLGLGYNPSVDRSEIDNAAVVHYNGNMKPWLEIAMTKYRSYWIKYVKYSHPYLRTSFPTFSHFSGFAISSARMMIHVLEHRMGRQSTGSSTLFPVPRCRPKEDFLCKGIDNHTRIEHRNPWINWSINALDMGTHRRYTLVVVSRLYKA 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00471 629 Coils Coil 99 119 - -
Vimu9g00471 629 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 232 534 IPR029044 -
Vimu9g00471 629 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 43 536 IPR029993 GO:0047262
Vimu9g00471 629 CDD GT8_like_1 230 528 - -
Vimu9g00471 629 Pfam Glycosyl transferase family 8 199 515 IPR002495 GO:0016757
Vimu9g00471 629 SUPERFAMILY Nucleotide-diphospho-sugar transferases 230 535 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00471 Vimu-Chr9 5592206 5598196 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g00471 6 535 Glycosyltransferase AT3G61130 80.000 0.0 903
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00471 K13648 - gmx:100811181 991.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu9g00471 9 5592206 5598196 Vimu9g00471 9 5592206 5598196 ECH
Vimu6g00314 6 3767514 3776751 Vimu9g00471 9 5592206 5598196 PCT