Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g00314 ATGCTACACTTAACCACCACAGCAACAACACGCAGTCAAATAGCAACAGTAAACGACAGCCACCAAAGTGGGGTGTATAGGGTGAGGAATGATGCGGCACAGAAAGAAGGGAGGAAGAAGGGGTGTAGATCCGTAATGGCACCCAACAACAACAGAACAAAAGGATCGCATTTTCCTCTGCTTGCCTTCCTCCTTTTGTGCCTCCTTGCGCCCCTTCTCTTCTTCCGCGCATCGCCCCTTCATACTTTTCACGATCTCACATCCACTACTCTTCTAATGCTTTATGTTCTTGATGTTATTGTTTCCAACACAAATGATGTGGGCCCTTTGAGTCTTGAGAGTTTTAGAAAGAATTTGTCTGCTTCATGGAGAGTTGTTGGATCAAAGGCTTCTAATGCTACAAATCAGGTTAACGAACCAGCAAACAGTGTTGAACAAGAGAAGCAAAATGGGAAGGAAGGAAGATTTTCAGTTGGTTATGCTCAGTGGACTGACACTCCTGCACAGCTATCCAGAAGGCAACTAATAGAGAAAAGGAAGGAAAAGCGTGCCGCTGAGTTGATAAGAGAGGATGAAGCAATGGTAAAGCTTGAAAATTCAGCTATTGAACACTCGAAATCTGTTGATTCAGCAGTTCTTGGTAAATACAACATTTGGAGGAAAGAAAATGAGAATGAAAATGCTGATTCTACTGTACGGTTGATGCGAGACCAAATCATTATGGCTAAGGTTTACTTGAGTATTGCAAAGATGAAGGACAGTCTTCAACTGTACCAAGAATTGGAATCTCAGCTTAAAGGAAGTCAGCGTGCTTTAGGTGAGGCAACTTCTGATGCTGAACTAAAGCCGAGCGATCATGAAAATATAAAAACTATGGGCCATGTTCTTTCCAAGGCGAAAGAGCAATTGTATGACTGCAAGTTGGTTACTGGGAAATTGAGGGCAATGCTACAAACAGCTGATGAGCGAGTTAGGAGCTTGAGAAAACAAAGCACGTTCCTTAGTCAGTTGGCTGCCAAGACCATACCGAATGGAATTCACTGCTTATCTATGCGCCTTACCATAGACTACTTCCTCCTTCCTCTTGAACAGAGAAAATTCCCTAGAAGTGAGAATTTGGAGAATCCTACTCTCTATCATTATGCCCTATTCTCGGACAATGTCTTGGCTGCATCTGTTGTTGTCAACTCAACTATTGTGAATGCAAAGGATCCTTCAAAGCATGTTTTTCACCTTGTTACTGATAAGCTAAATTTTGGAGCCATGAACATGTGGTTTTTGCTGAATCCTCCTGGAAAAGCTACAATCAATGTTGAAAATGTTGATGAATTTAAGTGGTTGAACTCATCCTACTGCCCAGTCTTGAGGCAGCTTGAATCTGCAACAATGAAAGAGTATTATTTCAAGGCAGGCCATCCAACTACTACTGGTGCTTCGAATCTCAAGTACAGAAATCCAAAATATCTGTCAATGCTTAACCACCTGAGATTCTATCTTCCACAAGTTTATCCTAAATTGGATAAGATTCTTTTTCTTGATGATGACATTGTTGTCCAGAAGGACCTGACTGGATTATGGGCTGTAAATCTTAATGGAAATGTAAATGGTGCTGTTGAAACATGTGGGGAGAGTTTTCACCGATTTGACAAGTACCTTAACTTTTCAAATCCACTTATTGCAAAAAATTTTGATCCAAATGCTTGTGGTTGGGCATACGGGATGAACATGTTTGATTTGAAGGTGTGGAAAAAGAAGGATATCACTGGCATATATCACAAGTGGCAGAATTTGAACGAAGACAGGGTGCTGTGGAAGCTGGGGACATTGCCTCCAGGGCTGATGACATTCTATGGATTAACACATCCGCTAAATAAATCATGGCATGTGCTTGGTCTGGGTTACAATCCAAGTGTAGATCGTTCGGATATAGATAATGCGGCAGTTGTACACTACAATGGTAATATGAAGCCATGGTTAGAGATAGCCATGACAAAATATCGGTCTTACTGGACCAAATATGTAAAATTTAGTCATCCCTATCTTCAGAATTGTAGGCTACATGAATGA 2067 0.4127 MLHLTTTATTRSQIATVNDSHQSGVYRVRNDAAQKEGRKKGCRSVMAPNNNRTKGSHFPLLAFLLLCLLAPLLFFRASPLHTFHDLTSTTLLMLYVLDVIVSNTNDVGPLSLESFRKNLSASWRVVGSKASNATNQVNEPANSVEQEKQNGKEGRFSVGYAQWTDTPAQLSRRQLIEKRKEKRAAELIREDEAMVKLENSAIEHSKSVDSAVLGKYNIWRKENENENADSTVRLMRDQIIMAKVYLSIAKMKDSLQLYQELESQLKGSQRALGEATSDAELKPSDHENIKTMGHVLSKAKEQLYDCKLVTGKLRAMLQTADERVRSLRKQSTFLSQLAAKTIPNGIHCLSMRLTIDYFLLPLEQRKFPRSENLENPTLYHYALFSDNVLAASVVVNSTIVNAKDPSKHVFHLVTDKLNFGAMNMWFLLNPPGKATINVENVDEFKWLNSSYCPVLRQLESATMKEYYFKAGHPTTTGASNLKYRNPKYLSMLNHLRFYLPQVYPKLDKILFLDDDIVVQKDLTGLWAVNLNGNVNGAVETCGESFHRFDKYLNFSNPLIAKNFDPNACGWAYGMNMFDLKVWKKKDITGIYHKWQNLNEDRVLWKLGTLPPGLMTFYGLTHPLNKSWHVLGLGYNPSVDRSDIDNAAVVHYNGNMKPWLEIAMTKYRSYWTKYVKFSHPYLQNCRLHE 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g00314 688 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 180 686 IPR029993 GO:0047262
Vimu6g00314 688 Coils Coil 251 278 - -
Vimu6g00314 688 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 381 682 IPR029044 -
Vimu6g00314 688 MobiDBLite consensus disorder prediction 131 150 - -
Vimu6g00314 688 CDD GT8_like_1 379 675 - -
Vimu6g00314 688 MobiDBLite consensus disorder prediction 131 145 - -
Vimu6g00314 688 Pfam Glycosyl transferase family 8 348 662 IPR002495 GO:0016757
Vimu6g00314 688 SUPERFAMILY Nucleotide-diphospho-sugar transferases 379 685 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g00314 Vimu-Chr6 3767514 3776751 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g00314 23 688 Glycosyltransferase AT3G61130 69.376 0.0 962
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g00314 K13648 - gmx:100798073 1138.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g00314 6 3767514 3776751 Vimu9g00471 9 5592206 5598196 PCT