Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00365 ATGGGGGAAGCTACAGAGAGGTATGCAGTTGTGACAGGAGCAAATAAAGGGATTGGATTAGAGATAGTTAGGCAGTTAGCTTCAGAAGGAATAAAGGTTGTACTCACTGCAAGGAATGAAGAGAGGGGTCTTCAAGCATTCGAAACACTCAAAGCCTCTCCTCTTTCTCATCTACTCTTCTTTCATCAGCTAGATGTCGCTCATGCTACAAGTGTAGCTTCTTTTGCAGACTTTATCAAATCCAAATTTGGTAAACTTGATATTCTGGTTAACAATGCGGGAATCAATGGAATTGTAATTGAAGACAGAGACTTATTTACTAAAGTCCTCGTGAATCGTGGGAGTTTCCCTAAAGAATCATGGGCAAGAGGAGTGTTGAGTGATGGTGATAACCTAACAGAAGAGAAAGTGGATGAAATAGTGAAGAAATTTCTAAGTGATTTCAAAGAAGGTTCATTAGAGAGTAAAGGGTGGCCAAAGTATCTGGGTGCATATATTGTATCGAAAGCTGCTATGAATGGGTACACGAGAATCCTTGCTAAGAAACATCCATCATTCTGCATAAACAGTGTTTGCCCTGGTTATGTGAAGACAGATATAACATCAAACACTGGTTTTCTAACAGTTGAAGAAGGTGCTGCTAGTCCTGTCAACCTTGCACTTCTTCCCAATGGTTCTCCATCTGGTCTCTTCTATTACAGAACTGATGTCGCTTCCTTTTGA 723 0.4039 MGEATERYAVVTGANKGIGLEIVRQLASEGIKVVLTARNEERGLQAFETLKASPLSHLLFFHQLDVAHATSVASFADFIKSKFGKLDILVNNAGINGIVIEDRDLFTKVLVNRGSFPKESWARGVLSDGDNLTEEKVDEIVKKFLSDFKEGSLESKGWPKYLGAYIVSKAAMNGYTRILAKKHPSFCINSVCPGYVKTDITSNTGFLTVEEGAASPVNLALLPNGSPSGLFYYRTDVASF 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00365 240 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 165 184 IPR002347 -
Vimu9g00365 240 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 IPR002347 -
Vimu9g00365 240 PRINTS Glucose/ribitol dehydrogenase family signature 184 201 IPR002347 -
Vimu9g00365 240 PRINTS Glucose/ribitol dehydrogenase family signature 165 184 IPR002347 -
Vimu9g00365 240 PRINTS Glucose/ribitol dehydrogenase family signature 84 95 IPR002347 -
Vimu9g00365 240 PRINTS Glucose/ribitol dehydrogenase family signature 8 25 IPR002347 -
Vimu9g00365 240 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 226 IPR036291 -
Vimu9g00365 240 Pfam short chain dehydrogenase 8 97 IPR002347 -
Vimu9g00365 240 Gene3D - 3 240 - -
Vimu9g00365 240 PANTHER (+)-NEOMENTHOL DEHYDROGENASE 118 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00365 Vimu-Chr9 4358708 4360784 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g00365 3 201 Acyl Lipid Metabolism Gene Families AT1G62610 29.864 6.32e-11 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00365 K15095 - gmx:100807079 303.523
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu9g00365 9 4358708 4360784 Vimu9g00365 9 4358708 4360784 ECH
Vimu6g00455 6 5349686 5352687 Vimu9g00365 9 4358708 4360784 PCT
Vimu9g00365 9 4358708 4360784 Vimu6g00460 6 5374652 5385064 PCT