Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00316 ATGGAGAACGAGAAAGCCTTTGAGTTTCTCAGACGCGTTCCTCTTCTGCAGAGGCTTCCGAGCTCGTCTGTAAGGAAGATATCTCAACTTGTGGATGTCAAAAGCTGCGAGCCGGGAGAGTATGTTGTTCGTGAGGGTGAACATGGAGATGGCGTGTACTTCATATTGGATGGAGAGGCTGAGGTTGTTGGATCCGTTACTGCCAATGATGAAAATCGTCCCGAGTTCCAGTTGAAAAGATATGACTACTTTGGTTATGGTTTGTCAAACACAGTTCACCAGGCAGGTGTAGTTGCTTTGTCTAAGCTGACATGCTTAGTGCTTCCCCATGAGCACTCAACACTGCTGCAGCCAAAATCTATCTGGAGAGCGGAAAATTGTGCTGAGGCATGCTCACCTGTGGAGAATATACTGCATGTGGAACCCATGGAGGTAGATATCTTCCGAGGAATTACCCTTCCAGATGCTCCAAGATTTGGAAAGGTTTTTGGGGGGCAGATGATTGGACAGGCACTGGCTGCAGCATCAAAATCTGTTGACTGTCTAAAGGTTGTTCATAGTTTGCATGCCTATTTTATTCTTGCGGGAGATTTAGAAATGCCAATTACATATAAAGTTGATCGTATCCGCGATGGGAGGAGCTTTGCTACAAGGAAAGTAGAAGGAATTCAAAAGGGAATTACCATATTCACGCTCTTGGCTTCATTTCAAAAGGAGGAATCGGGGATGGTCCACCAGAAAGTAGCTATACCATCTGTGCCATCTCCAGATAAGGCAAGATACAAGCTTCTACCAATGGAAGAGCTACGGGAGAGACGTCTTACTGACCCTCGTTTACCAGTAACCTACCGGAACAAAGTGGCTACATCTCAATTCATACCCTGGCCCATAGAGATACGGTTATGTGAATATGAATTCTCAACAAATATGACAAAATCTCCCCCCAGTTTGAGATACTGGTTTAGAGCAAAGGGAAAACTTTCACATGATCAAGCCTTGCATAGGTGCGTAGTGGCATATGCTTCAGATCTAATATTTCTTCAAGTAAGCTTGAATCCCCACCGTGAGAAGGGTTTCAGGACACGTTCTGTTAGTCTAGACCACTCTATGTGGTTTCATCGATCTGTAAAAGCAGATGATTGGGTGCTATTTGCGATCTTTACTCCTACTGCCCAGAGTGCACGCGTCTTTGTGACTGGCCAAATGTTCAATCAGAAGGGAGAGCTTCTTGTATCATTGGTTCAAGAAGGACTAGCCAGGAAAATTAATCAAGGAAATTCAGCCATTAAATCTAAGTTGTGA 1302 0.4447 MENEKAFEFLRRVPLLQRLPSSSVRKISQLVDVKSCEPGEYVVREGEHGDGVYFILDGEAEVVGSVTANDENRPEFQLKRYDYFGYGLSNTVHQAGVVALSKLTCLVLPHEHSTLLQPKSIWRAENCAEACSPVENILHVEPMEVDIFRGITLPDAPRFGKVFGGQMIGQALAAASKSVDCLKVVHSLHAYFILAGDLEMPITYKVDRIRDGRSFATRKVEGIQKGITIFTLLASFQKEESGMVHQKVAIPSVPSPDKARYKLLPMEELRERRLTDPRLPVTYRNKVATSQFIPWPIEIRLCEYEFSTNMTKSPPSLRYWFRAKGKLSHDQALHRCVVAYASDLIFLQVSLNPHREKGFRTRSVSLDHSMWFHRSVKADDWVLFAIFTPTAQSARVFVTGQMFNQKGELLVSLVQEGLARKINQGNSAIKSKL 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00316 433 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 249 421 IPR029069 -
Vimu9g00316 433 ProSitePatterns Cyclic nucleotide-binding domain signature 1. 42 58 IPR018488 -
Vimu9g00316 433 SUPERFAMILY cAMP-binding domain-like 6 112 IPR018490 -
Vimu9g00316 433 CDD Thioesterase_II_repeat1 317 418 - -
Vimu9g00316 433 CDD CAP_ED 15 112 IPR000595 -
Vimu9g00316 433 FunFam Acyl-CoA thioesterase II 1 124 - -
Vimu9g00316 433 CDD Thioesterase_II_repeat2 146 238 - -
Vimu9g00316 433 Pfam Cyclic nucleotide-binding domain 34 111 IPR000595 -
Vimu9g00316 433 Gene3D - 128 422 IPR042171 -
Vimu9g00316 433 SMART cnmp_10 15 132 IPR000595 -
Vimu9g00316 433 Pfam Thioesterase-like superfamily 161 418 - -
Vimu9g00316 433 Gene3D Jelly Rolls 1 126 IPR014710 -
Vimu9g00316 433 FunFam Acyl-CoA thioesterase II 129 423 - -
Vimu9g00316 433 PANTHER ACYL-COA THIOESTERASE 114 421 IPR003703 GO:0006637|GO:0047617
Vimu9g00316 433 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 132 242 IPR029069 -
Vimu9g00316 433 ProSiteProfiles cAMP/cGMP binding motif profile. 15 85 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00316 Vimu-Chr9 3813284 3821913 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g00316 1 433 Acyl Lipid Metabolism Gene Families AT1G01710 62.125 0.0 558
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00316 K01068 - gmx:100797680 776.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu9g00316 9 3813284 3821913 Vimu9g00316 9 3813284 3821913 ECH
Vimu6g00502 6 5770751 5783583 Vimu9g00316 9 3813284 3821913 PCT