Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00310 ATGGCTGATTTGTCAGAGAGAATTCTGAAGCTTGTGTTGATGAGCTTGGAGGATGGATTTGACAGGCTCTTCTATGATGGTGAATTCAAAAAGTGTCATGGTTACTTGAGGATAAACAACTACTCAGCTCCAGAAAGTATGGAGGATGAAGTTGAGGGGCTTGGAATGCACACTGACATGAGCTGTATAACAATCTTGTACCAAGATGAAATTGGAGGGCTTCAAGTGAAATCAGATGAAGGAAAGTGGATAGACATAAGCCCTTCTGAAGGGACACTAGTGGTGAACATAGGAGACATGATGCAAGCATGGAGCAATGATAAACTAAGATCTTCAGAACATAGAGTTGTTTTGAAGCAACCTTTGAACAGGTTTTCATTGGCCTTCTTTTGGTGTTTTGAGGATGATAAGGTGGTTATGGCACCAGATGAAGTTGTTGGAGAAGGAAATAAGAGGATGTATAATCCATTTGAATGCTTGGAATACTTGAAATTCAGAGAGAACAATCAAAGAGGAAGATTTGAAAAAGTTGGATATACAGTTAAGGATTTTGCAGGAATCAGGTCTCAACTGTGA 576 0.3958 MADLSERILKLVLMSLEDGFDRLFYDGEFKKCHGYLRINNYSAPESMEDEVEGLGMHTDMSCITILYQDEIGGLQVKSDEGKWIDISPSEGTLVVNIGDMMQAWSNDKLRSSEHRVVLKQPLNRFSLAFFWCFEDDKVVMAPDEVVGEGNKRMYNPFECLEYLKFRENNQRGRFEKVGYTVKDFAGIRSQL 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00310 191 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 1 164 - -
Vimu9g00310 191 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 32 134 IPR005123 -
Vimu9g00310 191 SUPERFAMILY Clavaminate synthase-like 1 170 - -
Vimu9g00310 191 PRINTS Isopenicillin N synthase signature 57 78 - -
Vimu9g00310 191 PRINTS Isopenicillin N synthase signature 93 119 - -
Vimu9g00310 191 Pfam 2OG-Fe(II) oxygenase superfamily 37 130 IPR044861 -
Vimu9g00310 191 Gene3D - 1 165 IPR027443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00310 Vimu-Chr9 3762730 3763305 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g00310 36 162 Glycosyltransferase AT5G59530 39.231 1.24e-20 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00310 - - gmx:100782766 360.147
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g00531 6 6480216 6481372 Vimu9g00310 9 3762730 3763305 PCT