Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g00531 ATGTTGTGTGCTTCTTATACCAAGTTTCTATATATATTGAATGACTCAAAACTTAGATGGCAACATGTATGCATATGTATTAATGTCCTAGGCATTATTATGTCTAACCCTAAATCTCATGATGGAATTCCTATTTTAGATCTTTCTGAGCCATTGCAGCCATCTTCTCTATTTTCTGTCTATAAAGCAGCGAAAGATTGGGGGGTTTTCTACATAATCAACCATGGAATCTCCATAGATCTTTGCAGGGATATCCAATCACTCTCCAAAAACCTCTTCAACCTTCCTTCTCATACTAAACTCAGACTTGGTCCTTTCTCATCTTTCAAATCTTACACACCTCATTTCATTGCCTCTCCTTTCTTTGAGAGCTTCAGAGTTAATGGACCCAATTTTTATGTTTCTGCTAACACTTCTTCTCAAATTCTCTTTGACAAAAACGACTCCAAATTCAGTGTGATGATTGAAGAATACTGTAGAAAGATGGAAGATCTGTCAAAGAGAATTGTAAAGATCATGCTGATGAGCTTAGGGGAGGGAATGGAGAAGAAGTTTTATAATTCAGAGTTCAAGAAGTGCCATGGATACTTGAGGATAAACAATTACTCAGGAGGAGATGTTAAGGAGGAGGAAGTTGAGGGGCTTGGAATGCATACTGATATGAGTTGTATAACCATATTGTATCAAGATGAGATTGGAGGGCTTCAAGTGAGATCAAAGGAGGGAGAGTGGATTGGTATAAGCCCATCAGAGGGAACCCTAGTGTTGAACATTGGAGACATGTTGCAAGCATGGAGCAATGACAAACTCAGCTCTTCAGAACACAGAGTTCTTTTCAACAATCATTTCAACAGGTTTTCTCTAGCCTTCTTTTGGTGCTTTGAAAATGATAAGCTCATTTTTGCACCAGATGAAGTTCTTGGAGAAGGAAACAAGAGGATGTACAAACCATTTCTCTGCTTCGATTATTTGAAATTTAGAGAGAACAATGAAAAGGGAAGATTTGATAAGGTTGGCTTCACAGTCAGAGACTTTGCTGGCATCAAGCCTCAATAA 1056 0.3816 MLCASYTKFLYILNDSKLRWQHVCICINVLGIIMSNPKSHDGIPILDLSEPLQPSSLFSVYKAAKDWGVFYIINHGISIDLCRDIQSLSKNLFNLPSHTKLRLGPFSSFKSYTPHFIASPFFESFRVNGPNFYVSANTSSQILFDKNDSKFSVMIEEYCRKMEDLSKRIVKIMLMSLGEGMEKKFYNSEFKKCHGYLRINNYSGGDVKEEEVEGLGMHTDMSCITILYQDEIGGLQVRSKEGEWIGISPSEGTLVLNIGDMLQAWSNDKLSSSEHRVLFNNHFNRFSLAFFWCFENDKLIFAPDEVLGEGNKRMYKPFLCFDYLKFRENNEKGRFDKVGFTVRDFAGIKPQ 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g00531 351 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 43 325 - -
Vimu6g00531 351 Gene3D - 32 326 IPR027443 -
Vimu6g00531 351 Pfam non-haem dioxygenase in morphine synthesis N-terminal 43 114 IPR026992 -
Vimu6g00531 351 Pfam 2OG-Fe(II) oxygenase superfamily 198 291 IPR044861 -
Vimu6g00531 351 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 193 295 IPR005123 -
Vimu6g00531 351 SUPERFAMILY Clavaminate synthase-like 30 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g00531 Vimu-Chr6 6480216 6481372 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g00531 43 323 Glycosyltransferase AT5G59530 26.910 3.16e-21 91.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g00531 - - gmx:100812108 533.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g00531 6 6480216 6481372 Vimu6g00531 6 6480216 6481372 ECH
Vimu6g00531 6 6480216 6481372 Vimu9g00310 9 3762730 3763305 PCT