Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00306 ATGGACAATTCATCCAACTTTGATGAAAACTCTGATGTGGGGTACCAACCTTCACATTCTTCTGTGGATCAAAATGACCATTCAATCACTGAAACTGTTGGATACTCCACATTCAGTGGCGATTCCTTTGCGTATTGCAGGACTAACTCTGAGGTCTCAAACTTCTCTGAGCCTATTGATGACAATAGCTTTGGAAGTGAACATTCACCTTCTCTATGGACACCTGTGAAGCATGGAGCAAGTCAAGCTGTTCTTTCAAGGTTAGGAATGAAGCAACCCGGGAACTCAATGGATGATAAATCTGAGGACCTTGATCTCTTGGAGTCAGAGCTGGATATGATGAGGGAAAGATTTTCAAAGCTTCTATTGGGGGAAGACATGTCTGGTGGTGGGAAAGGTGTTTGCACTGCAGTTACAATATCAAATTCAATCACCAATCTCTATGCAACTGTTTTTGGGCAAAATTTAAAGTTGGAGCCTCTTAATCCTGAGAAGAAGGCCATGTGGAAAAGAGAAATGAATTGTCTCCTATCTGTGTGTGATTACATAGTAGAATTTGCTCCAACTGCACAATATCTAGAAGATGGTACAATTGTGGAGATGATGACAAGTAGACCAAGGTCAGATATTTATATCAACCTCCCAGCTCTTCAAAAGCTTGACACAATGCTCATAGAAATATTGGACAGTTTCCATGATACTGAATTTTGGTATGCAGACCAAGGGAGCTTATCAGGTAACTCAACTCGGTCACGTGCAGGCTCATTTCGAAGGATTGTTCAGAGGAAAGATGAGAAATGGTGGCTTCCAGTTCCTTGTGTTCACCCTGGAGGCCTCTCTGAAAAGTCAACAAAACACTTGAGTGAGAAAAGAGACTGTGCTAATCAAATTCATAAAGCAGCTATGGCTATAAATAGCAGTGTTCTTGCAGAGATGGACATCCCAGAAACATATATGGCAAATCTTCCCAAGGTAAGTCCTCATTCAATTATTGTTGTTGGAGATACAACATTGAAAGTATTGAAAAAGAAGACGAGTTTATAG 1044 0.4071 MDNSSNFDENSDVGYQPSHSSVDQNDHSITETVGYSTFSGDSFAYCRTNSEVSNFSEPIDDNSFGSEHSPSLWTPVKHGASQAVLSRLGMKQPGNSMDDKSEDLDLLESELDMMRERFSKLLLGEDMSGGGKGVCTAVTISNSITNLYATVFGQNLKLEPLNPEKKAMWKREMNCLLSVCDYIVEFAPTAQYLEDGTIVEMMTSRPRSDIYINLPALQKLDTMLIEILDSFHDTEFWYADQGSLSGNSTRSRAGSFRRIVQRKDEKWWLPVPCVHPGGLSEKSTKHLSEKRDCANQIHKAAMAINSSVLAEMDIPETYMANLPKVSPHSIIVVGDTTLKVLKKKTSL 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00306 347 Coils Coil 97 117 - -
Vimu9g00306 347 MobiDBLite consensus disorder prediction 1 26 - -
Vimu9g00306 347 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 109 342 IPR005512 GO:0005085
Vimu9g00306 347 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 49 329 IPR038937 GO:0005085
Vimu9g00306 347 Gene3D PRONE domain, subdomain 1 103 343 - -
Vimu9g00306 347 FunFam Rop guanine nucleotide exchange factor 14 103 345 - -
Vimu9g00306 347 ProSiteProfiles PRONE domain profile. 101 347 IPR005512 GO:0005085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00306 Vimu-Chr9 3715255 3717524 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00306 - - gmx:100785956 573.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu9g00306 9 3715255 3717524 Vimu9g00306 9 3715255 3717524 ECH
Vimu6g00532 6 6487464 6497756 Vimu9g00306 9 3715255 3717524 PCT