Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00265 ATGGCCCAAGAAACTGTGGTGAAGAGGTCACCCTCTCAAGCAAAATTTCACAGGGTTCAATTTGCAATAAGGCTGTTGGTGCTGGTTTTGTTCTTGTGTTGGATTTTCATTTGGATAATGTCACCCACAAATACTTTTACACAAATATGGCTTCCAAGATACAGTGCAAAGACTGGCAATACAACTTATTTGGGTTCAAAAGGTTCTAATCTTCTGATGTACACATTCTCAATCTTGCTCATAGCTACTTTGGGATGGGAAGAGAAGCTAGACTCTGCAGGATTAAGGTTTGGTGTTGTTGGGAACATATGTTTGGTATTCATGTTTTTTCCTGTGGCTCGTGGTTCAAGCGTGCTGCCACTGCTTGGTCTCACTTCTGAAAGTTGCATCAAGTACCATATTTGGCTTGGACATATTGCCATGCTACTATTCACTGCTCATGGTTTGAGCTTCATCATCCATTGGGCAATTATTAATCACATGTCTGCGATGCTGGAATGGAAGAAAAACGATATATCAATTGTGGCTGGAGAGATAGCTTTGCTTTCTGGTTTGTTACTATGGATTGCAACCATTCCTCGCATTAGGCGAACTTATTTTGAGCTCTTCTATTACACTCATCACCTCTACATCCTCTCCATAGTCTTCTTCATCTTTCATGTTGGCATTTCCTATGCCTTAATCATGCTCCCTGGTTTCTACCTCTTCATGGTCGATCGTTACTTGAGGTTTCTGCAATCAAGACGCCAAGTTCGTCTGGTTTCTGCTCGGGTTTTGCCATGTGAAGCTGTGGAACTCAACTTCTCAAAGGGCCATGGATTAACTTACAACCCCACAAGTGTGATGTTCATAAATGTACCAATCATATCCAAGCTGCAGTGGCATCCATTTACTGTTACTTCTAATAATAATTTGGAGGCAGACAAGCTAAGTGTTGTTATTAAAAGTGAAGGACCTTGGACCAATAAGCTATACCAGTTGCTTTCAACTCCTTCCACAATTGATCGTCTTTCTGTGTCTGTCGAAGGTCCTTATGGACCTGCTTCAACCAACTATCTACGGCATGACACTCTTGTGATGGTGAGTGGAGGAAGTGGCATCACACCTTTTATATCCATCATTCGGGAGCTAATACATCTGAACACTACATTCAAATGCAAAACCCCAAAAGTCGTCCTAATTTGTGCCTTCAAGAACTCTTCTTCTCTGTCAATGCTAGAGTTGATCCTCCCAATAAATGGCACCCCTTCTGATATTTCTAATTTAGAATTACATATTGAGGCCTACATCACAAGGGACAAGGAGCCTAAAGCAGATGGCCCTATTCACCCTCAAATCAGATGGTTGAAGCCAAATCCATCTGATGAACCAGTACACGCTATATTAGGTCCAAACAGTTGGCTCTGGCTTGGTGCTATAATTTCATCCTCTTTCGTCGTTTTCCTTATCTTAATAGGGATCATTACCCGTTACTACATTTTCCCAATTGATCATAACTCAAATCAAATATTTTCCTACCCTTTGGATGCATTCCTTAACATGCTAGTAATATGTGTGTCCATAAGAACTGGAAAGTCTTCCATATCAGTCACTATTCACGCCACCAGTGTGCATTATGGTGTAAGACCTGACCTAAGAAAGATCCTATTTGAGCACAAAGGGTCTAGTGTGGGAGTTCTTGCTTCAGGACCCAAAACAATGAGGCATGAGGTTGCAGCCATTTCCTCCTCATCTGGTTTAGCTGAGAATCTGCATTTTGAGTCTATTAGCTTTAGCTGGTGA 1782 0.4153 MAQETVVKRSPSQAKFHRVQFAIRLLVLVLFLCWIFIWIMSPTNTFTQIWLPRYSAKTGNTTYLGSKGSNLLMYTFSILLIATLGWEEKLDSAGLRFGVVGNICLVFMFFPVARGSSVLPLLGLTSESCIKYHIWLGHIAMLLFTAHGLSFIIHWAIINHMSAMLEWKKNDISIVAGEIALLSGLLLWIATIPRIRRTYFELFYYTHHLYILSIVFFIFHVGISYALIMLPGFYLFMVDRYLRFLQSRRQVRLVSARVLPCEAVELNFSKGHGLTYNPTSVMFINVPIISKLQWHPFTVTSNNNLEADKLSVVIKSEGPWTNKLYQLLSTPSTIDRLSVSVEGPYGPASTNYLRHDTLVMVSGGSGITPFISIIRELIHLNTTFKCKTPKVVLICAFKNSSSLSMLELILPINGTPSDISNLELHIEAYITRDKEPKADGPIHPQIRWLKPNPSDEPVHAILGPNSWLWLGAIISSSFVVFLILIGIITRYYIFPIDHNSNQIFSYPLDAFLNMLVICVSIRTGKSSISVTIHATSVHYGVRPDLRKILFEHKGSSVGVLASGPKTMRHEVAAISSSSGLAENLHFESISFSW 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00265 593 Pfam FAD-binding domain 250 349 IPR013112 GO:0016491
Vimu9g00265 593 PRINTS Cytochrome B-245 heavy chain signature 553 571 IPR000778 GO:0016020|GO:0016491
Vimu9g00265 593 PRINTS Cytochrome B-245 heavy chain signature 175 198 IPR000778 GO:0016020|GO:0016491
Vimu9g00265 593 PRINTS Cytochrome B-245 heavy chain signature 200 220 IPR000778 GO:0016020|GO:0016491
Vimu9g00265 593 SFLD Ferric reductase subgroup (FRE) 15 593 - -
Vimu9g00265 593 Pfam Ferric reductase like transmembrane component 97 217 IPR013130 -
Vimu9g00265 593 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 339 412 IPR039261 -
Vimu9g00265 593 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 246 351 IPR017927 GO:0016491
Vimu9g00265 593 Gene3D - 339 591 IPR039261 -
Vimu9g00265 593 CDD NOX_Duox_like_FAD_NADP 253 432 - -
Vimu9g00265 593 PANTHER NADPH OXIDASE 26 591 - -
Vimu9g00265 593 SFLD Ferric Reductase Domain 14 593 - -
Vimu9g00265 593 FunFam Ferric reduction oxidase 3 344 461 - -
Vimu9g00265 593 Pfam Ferric reductase NAD binding domain 355 575 IPR013121 GO:0016491
Vimu9g00265 593 SUPERFAMILY Riboflavin synthase domain-like 244 334 IPR017938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00265 Vimu-Chr9 3208849 3213089 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g00265 19 85 Miscellaneous Gene Families AT1G01580 40.299 3.56e-10 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00265 K00521 - gmx:100790114 874.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g00568 6 6886353 6889875 Vimu9g00265 9 3208849 3213089 PCT