Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00217 ATGTCGCAGTTGTTGAATAAAGCGAAGAACTTCGTGTCGGAGAAGGTAAACGAGATGGCGAAGCCTGAGGCGAGTGTGAGCAACGTGGACTTCAAGCGCGTGAGCAAAGATAGCTTGGAGTACTTGGTGAAGGTAGCTGTTCGTAACCCTTATTCAACTTCCATACCGATATGTGAGATCAGATACTCTTTCAAAAGCGCGTCAAGGGAGATAGCATCAGGGACAATTCCAGACCCAGGATTTTTGAAGTCAAAGGACACGACCATGGTGGATGTGCCAGTTAAGGTTCCATACAGCATATTAATGTCCTTAGCAAGGGACATTGGTGCCGACTGGGACATCGACTACCAACTCGATATTAGTCTCATTATTGACCTTCCTGTCATTGGCAACTTCACCATTCCTCTCTCTCACACCGGAGAGATCAAGCTTCCAACCCTCTCTACCATGTTTGCCTAG 459 0.4706 MSQLLNKAKNFVSEKVNEMAKPEASVSNVDFKRVSKDSLEYLVKVAVRNPYSTSIPICEIRYSFKSASREIASGTIPDPGFLKSKDTTMVDVPVKVPYSILMSLARDIGADWDIDYQLDISLIIDLPVIGNFTIPLSHTGEIKLPTLSTMFA 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00217 152 Gene3D - 17 151 - -
Vimu9g00217 152 PANTHER - 3 146 IPR045043 -
Vimu9g00217 152 Pfam Late embryogenesis abundant protein 44 140 IPR004864 -
Vimu9g00217 152 SMART why 24 141 IPR013990 GO:0009269
Vimu9g00217 152 FunFam Desiccation protectant protein Lea14-like 17 151 - -
Vimu9g00217 152 SUPERFAMILY LEA14-like 2 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00217 Vimu-Chr9 2672861 2674854 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00217 - - gmx:547533 265.388
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu9g00217 9 2672861 2674854 Vimu9g00217 9 2672861 2674854 ECH
Vimu6g00593 6 7150370 7152277 Vimu9g00217 9 2672861 2674854 PCT