Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g00593 ATGACTAACCTTGTGAGTGGAAGCTCGGTAGAGCCGCTCGTCCAGATCCGGGAACACGGAAGGGGCCACGTTCGACCAAAAGTCGTCACGTGTCGGCATTCCGTTTGTCTGGTTTTGCCGTTTATAAGTATGCGAGCGAGTTTGGGTGTTAAGGTATCGCTTGGTGTTATCGGTGTGAGTGTGATATTTGCAGTGCTGAAAATGTCGGAGTTGTTGGACAAAGCTAAAACTTACGTTGCGGACAAAGTGGCGAACATGCCGAAGCCAGAGGCGACGGTGGCCGACGTCGATTTCCAAAAGGTCAGCCGCGACAGCGTCCAGTACTTGGCCAAGGTTTCTGTCTCTAATCCTTATGCCACTCCCCTCCCTATTTGTGAGATCAAGTACTCCTTAAAAAGTGCAGACAGGGAGATAGCATCAGGGACGATACCTGACCCGGGGTCGTTGAAGGCGAAGGACTCAACAATGTTGGATGTGCCAGTGAAGGTGCCTCACACGGTGTTACTGAGCTTGGCAAGGGACATCGGTGCAGATTGGGACATTGATTATCAGTTGGATATTTGGCTCATCATTGACCTTCCTGTCGTTGGCAACATTACCATTCCTCTTTCTCAGAAGGGAGAGATCAAGCTCCCAACCATCAGAGACATGTTTGCCTAA 660 0.503 MTNLVSGSSVEPLVQIREHGRGHVRPKVVTCRHSVCLVLPFISMRASLGVKVSLGVIGVSVIFAVLKMSELLDKAKTYVADKVANMPKPEATVADVDFQKVSRDSVQYLAKVSVSNPYATPLPICEIKYSLKSADREIASGTIPDPGSLKAKDSTMLDVPVKVPHTVLLSLARDIGADWDIDYQLDIWLIIDLPVVGNITIPLSQKGEIKLPTIRDMFA 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g00593 219 PANTHER - 69 213 IPR045043 -
Vimu6g00593 219 Gene3D - 84 218 - -
Vimu6g00593 219 FunFam Desiccation protectant protein Lea14-like 84 218 - -
Vimu6g00593 219 SMART why 91 208 IPR013990 GO:0009269
Vimu6g00593 219 Pfam Late embryogenesis abundant protein 111 207 IPR004864 -
Vimu6g00593 219 SUPERFAMILY LEA14-like 70 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g00593 Vimu-Chr6 7150370 7152277 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g00593 - - var:108328368 394.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g00593 6 7150370 7152277 Vimu6g00593 6 7150370 7152277 ECH
Vimu6g00593 6 7150370 7152277 Vimu9g00217 9 2672861 2674854 PCT