Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00208 ATGTGGGGCACCATTGCCAATTTCAAGGAAAACCTCAACAAGATCGCGCTCGATGTTCATGACGATGACGAAATTCTCCGTGAGTACGGTACCGGCATCACTGCCAATGGCGACAACTCCGCTGTCTCCGGTCGCCGGAGTTCGCACGGTTCCGCCAGTCCCAAATCGGGGATTACGTCGCCGCTCGCCAACGGCATCAATCATGCTTCTCCTCCTGAGGTTAGGAATGGGTTTGACTCTCCCACTCTTGCTATCACTAGGGAGGGGGAGAAACTTGAAGTCAATCAAATCGGGTTATACATCAAAGTTGTGTTGGATGTTAGAAAAGTGGGGAAAACCCGAATCCAATCAAAACAGGATTTTGTCACCAAAGTCGGGTTGTGGTTAGACTGGCACCTGCTGATAGAACAGTACAAAGCAGAAATCAAGAAACTTCAAGCATCTGAGGCAGAGATTAAAGCATTATCAGTTAATTATGCTGCTCTGTTAAAAGAAAAAGAGGATCACATTGTTAAATTGAATAGAGAAAATGGCTCACTAAAGCAGAATTTGGAGGCTACAAATGCTGCTCTGCGTGTCTCCAGAATTGAAGGTTCTGGAGTATCTACAAATGGAACTTATACGGTCAAGGGAAGTACAAATCAATCACCTAATCGACAGAACAAGTTCAACTTGCAACGTAAAAGTCGTAATGCCATGAACAATGGAACTGTGTCTACTTTGAAATCTGATGCTATTCAAAGTGAGATGGAATTCAAACATTCAAATTTACAAGGAAATTCCAAGGAGCTTGCGCTTGATGGAAATACCTCAGCAGCTGTTCAACATTCCTCAGATATACAGAGGTTGAAGTTAGAACTAGAGGAAGAACGTGATCAATTGGCAAAGATTCAGCTCAAATTCCAAGAGGAACAGAGATTAAGCCAGTCTTTTCAAGAGGAGCTTAAAATGTTAAAGTTGGAAAGAGATAAAAAATCAATGGAGATGAACAAAATACACAACGAGTTGAATGAAAAAGTATCAGAAATAAAGCATCTACAATTAGAGTTGACAAAACGGGAAAATGAATCAGGGGAGGCTGTGGATAGCTTAAAAAGATTTATCAAAACTTTAGAGAAGGAAAACACCACTCTTAAGATGGAAAAAAATGAAATTGAGGCTGCTCTTGAAAATAGCAGGAAGTCTTTCACAGATAAAATGATGCGTGATGCTTCACATACTCAGGAAAAAGATTCAAGCAGTGTCAGTGATATGCCAGATCACTCCAAAAGTTTTCCAGAAAAGGAAGAAATGGAAAGATCATTAGACAAGCTAAGCAAAAATTTGAATGAAGCACAGCGGGACAGGGACAAAGCAGTACAAGAATTGAACCGTCTCAAACAACATTTACTGGAAAAGGCATCTGAGGAAGCAGATAAAATGGATGAAGACAGCAAAATCATCGAAGAGCTACGTGATAGCAATACTTATTTAACAGCTCAAATATCACATCTTGAGAGAACTCTGAAGCAAGCACTTGCAAGTCAAGAGGAACTGAAGATGGCTAACAATAGTGAAATTCTCAAGTCTAGAGAAGCCATTAATGACCTGAACAAGAAGCTTACAAACTGTATGAGCACTATAGATGCTAAAAATATTGAACTTTTAAATCTACAGACAGCTCTAGGGCAGTACTATGCTGAAATTGAAGCCAAGGAGCATTTAGAAAGGGAGTTGGCTCATGCAAGAGAGGAAATTGCCAAGCTTTCTCAACTTTTGAAAGAAGCCGATCACAGAGCAGAAGTTTCAAGGAATGAAAGAGAAGAAATTTTAGGGAAGCTTTCACAATCTGAGAAGGTGCAAACTGAATGGAGAAGTAGAGTAAGCAAGCTTGAGGATGATAATGCCAAATTGAGGAAAGTTCTTGAGCAGAGTATGACACAGTTGAATAGAATGTCGGTAGATTCGGATTATCTTGTTGACAGGCGCATTGTGATAAAATTACTTGTAACTTATTTTCAGAGAAATCACAGCAGAGAGGTTTTGGATCTTATGGTTCGCATGCTAGGATTTTCTGATGAGGATAAGCAAAGAATTGGTGGTGCTCAACAAGGTGCTGGTAAAGGTGTTGTTCGTGGAGTTCTAGGGCTGCCTGGCCGCCTGGTTGGAGGCATCCTGGGAGGAAATTCAACTGAATCAGCAGCTAATGCGGGATCTGATAACCAGTCTTTTGCAGATCTGTGGGTTGATTTTCTTCTCAAGGAAACGGAAGAAAGAGAAAAGAGAGAATCATCAGGAAATTCAGGTAAATCCACGGAAGATCCTTCCAATAAAAGTCCAAATACTATGTCTGCCACTCCACCATTTTCCAACAAAAGTCCAAACACTATTTCTGCCACTCCACCATTTTCCAATAAAAGTCCAAGTACTATTTCTGCTACTCCACCCTTTTCGAATAGGACGTTCGATGCAGGAAAAACATCACCTTTTCAGATTACTCCAATTAATCAAAACGTCAGTCCTCCCCCTCGTGTTTATTTTCAGCGCTCTGAACATTTTGATTCTGAGTTCTCAACAGTTCCTCTTACGTCATCCGATGCTCAAACATCTACTTCTAATCTGCTTCCAAGATACTAA 2616 0.4067 MWGTIANFKENLNKIALDVHDDDEILREYGTGITANGDNSAVSGRRSSHGSASPKSGITSPLANGINHASPPEVRNGFDSPTLAITREGEKLEVNQIGLYIKVVLDVRKVGKTRIQSKQDFVTKVGLWLDWHLLIEQYKAEIKKLQASEAEIKALSVNYAALLKEKEDHIVKLNRENGSLKQNLEATNAALRVSRIEGSGVSTNGTYTVKGSTNQSPNRQNKFNLQRKSRNAMNNGTVSTLKSDAIQSEMEFKHSNLQGNSKELALDGNTSAAVQHSSDIQRLKLELEEERDQLAKIQLKFQEEQRLSQSFQEELKMLKLERDKKSMEMNKIHNELNEKVSEIKHLQLELTKRENESGEAVDSLKRFIKTLEKENTTLKMEKNEIEAALENSRKSFTDKMMRDASHTQEKDSSSVSDMPDHSKSFPEKEEMERSLDKLSKNLNEAQRDRDKAVQELNRLKQHLLEKASEEADKMDEDSKIIEELRDSNTYLTAQISHLERTLKQALASQEELKMANNSEILKSREAINDLNKKLTNCMSTIDAKNIELLNLQTALGQYYAEIEAKEHLERELAHAREEIAKLSQLLKEADHRAEVSRNEREEILGKLSQSEKVQTEWRSRVSKLEDDNAKLRKVLEQSMTQLNRMSVDSDYLVDRRIVIKLLVTYFQRNHSREVLDLMVRMLGFSDEDKQRIGGAQQGAGKGVVRGVLGLPGRLVGGILGGNSTESAANAGSDNQSFADLWVDFLLKETEEREKRESSGNSGKSTEDPSNKSPNTMSATPPFSNKSPNTISATPPFSNKSPSTISATPPFSNRTFDAGKTSPFQITPINQNVSPPPRVYFQRSEHFDSEFSTVPLTSSDAQTSTSNLLPRY 871
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00208 871 Coils Coil 495 515 - -
Vimu9g00208 871 MobiDBLite consensus disorder prediction 390 435 - -
Vimu9g00208 871 Coils Coil 329 356 - -
Vimu9g00208 871 MobiDBLite consensus disorder prediction 850 871 - -
Vimu9g00208 871 Coils Coil 621 641 - -
Vimu9g00208 871 PANTHER MYOSIN HEAVY CHAIN - RELATED 93 821 - -
Vimu9g00208 871 Coils Coil 428 484 - -
Vimu9g00208 871 MobiDBLite consensus disorder prediction 36 66 - -
Vimu9g00208 871 Coils Coil 361 391 - -
Vimu9g00208 871 MobiDBLite consensus disorder prediction 762 837 - -
Vimu9g00208 871 Coils Coil 273 321 - -
Vimu9g00208 871 Coils Coil 565 599 - -
Vimu9g00208 871 MobiDBLite consensus disorder prediction 36 80 - -
Vimu9g00208 871 Coils Coil 135 190 - -
Vimu9g00208 871 MobiDBLite consensus disorder prediction 751 838 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00208 Vimu-Chr9 2592182 2603791 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00208 - - vun:114167146 1287.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu9g00208 9 2592182 2603791 Vimu9g00208 9 2592182 2603791 ECH
Vimu9g00208 9 2592182 2603791 Vimu6g00600 6 7224108 7237260 PCT