Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g00600 ATGTGGGGCACAATCGCCAACTTCAAGGAGAATTTGAACAAGATCGCCCTCGACGTTCATTACGCCCACGATGACGACGACGACGACGACGACCAACACCACGTCGTCAGCCCCACCGTCTCCGATCGCCGCAATTCTCACACCTTTGCCCATTCCAATTCGTTTCCCAGCTCTCCGCCGCCCAATGGAATGTCCGATCACCCCTACGCTTCTGAGATAGAACAATATAAAGCAGAAATCAAGAGACTTCAAGCATCTGAGGCAGAAATTCAAGCACTATCGGTTAATTATGCAGCTATATTAAAAGAAAAAGAGGGAAATAGTGACCTGTCATCCAATCGACAGCATTGGTTCACAACTCAAATGAAAAATCTTTATGCTACAAACAATAGAACCACATCTGCTTTGGAATCCGATGATATTCAAACCAAGACGGTATCTAAGCACTCAAACTCACGAGTAAAGGACAAGGAGCTAGCAGATATGGTAGAGGGAAAAAGTAGCCCAGCAGCAGCAGTACAACATTCCGCTGATATACATAAAATGAAGTTGGAACTAGAGCAAGAACAGAATAAAATGGCACATATTCAGCTTAAATTACAGGAGGAAGAGAAATTGAACAAGTCATTCCAAGAGGAGCTTAAATTGTTGAAGTTGGAAAGAGACAAAACAACATATGAGATGAGCAAATTACACAATGAATTGAATGGGAAAATATCAGAAATTAATCGTCTGCAAATGGAGTTGAGTAGACAGGAAGATGAAGAAACAAGTGACGTGGATGGCTTCAAGAGACTTATTGAATCTTTGGAGAAGGAAAACACTACTCTTAAGTTGGAAAAGGATGAACTTGAGGCTGAGGTCAAATTAATTTGGACTTCTGGTAAAATATCACCTGATGCTTCTCAGATCCAGAAAAGGATTCCAAGCTTTAACAATCATTTACCAGATCGTTCCAAAAGTTTTCCAAGGAATGAAGAGTTGGAAAGATCCTTGCATAAGCTAAGTGAAGAACTGGAGGAAACACAAAAGAGAAATGAAGAGTTGGAAAGATCCTTACTTAAGCTAAGTAAAGAATTGGAGGAAACACAGAAGGAGAGGGACAAAGCAGTACAACAATTGACCCGTCTTAAACAGCATTTGTTAGAAAAGGAATCTGAAGATTCCGAAAAAATGGACGAGGATAGCAAAATAATTGAAGAACTTCGTGACGGCAATAATTATTTGAGGGCTCAAATATCCCATCTTGAGAGAACTCTAAAACAGGGAACTGCGAGTCAGGAGAAACTGAAGATGGAAAATGACAATGAAATTCTCAAATCCAGGGAAATCATTGATGACCTGAACAAGAAGCTGACTGACTGTATGAGCACAATAGATGCTAAGAATACAGAACTTCTAAATCTACAGACAGCTCTTGGACAATATTATGCCGAAATTGAAGCTAAGGAACATTTAGAAGGAGATCTGGCTCGTGCAAAGGAAGAAAACTCTAAGCTTTCTCTACTGTTGAAAGATGCACAATGCAGAGCAGATGTCTTGATCAGTGAAAAAGAAGAAATTTTAGCTAAGCTTTCTAAATCTGAAAAGCTACAATCAGAATGGAGAAGTAGAGTAAGCAAGCTCGAAGAAGACAATTCCAGGTTGAGGCGAGCGGTTGAACAGAGTATGACAAGGCTAAATAGAATGTCAGTGGATTCAGATTTTCTTGTTGACAGGCGCATTGTGATAAAATTACTTGTTACTTATTTCCAGAGAAACCACAGCAAAGAGGTTTTGGATCTAATGGTTCGCATGCTGGGATTCTCTAATGAGGACAAGCAAAGAATAGGTGTTGCTCAACAAGGTCCAGGAAAAGGTGTTGTCCGCGGTGTTCTTGGGTTGCCTGGCCGCCTAGTTGGAGGTATCTTGGGAGGTGGTGGTTCCACTGAATCAGCTGCAAATGCGGGAGCTGATAACCAGTTTCCCTTTCAGTCCTTTGCAGATCTGTGGGTTGATTTTCTTCTCAAGGAAACAGAAGAAAGAGAGAAGAGGGAGTCAGCAGGAACTAGAGATAAATCCATGGATGATTCGCATGATAGAAGTTATAGTAATTCATCTCCACCACATTCCAATCAAAGGTTTAGGACTGGAACAGTACCAATTAGCTCATCCACTAATCAAAACATCAGTTCTCTCCCTCGTGGATACTTTCAGCACTCGGAACAACTTGGTTCCGAGTTCTCAACAGTTCCCCTTACATCTTCTTCATCAGATAGTTCAAAACTTCTTCCCAGATACTAA 2283 0.41 MWGTIANFKENLNKIALDVHYAHDDDDDDDDQHHVVSPTVSDRRNSHTFAHSNSFPSSPPPNGMSDHPYASEIEQYKAEIKRLQASEAEIQALSVNYAAILKEKEGNSDLSSNRQHWFTTQMKNLYATNNRTTSALESDDIQTKTVSKHSNSRVKDKELADMVEGKSSPAAAVQHSADIHKMKLELEQEQNKMAHIQLKLQEEEKLNKSFQEELKLLKLERDKTTYEMSKLHNELNGKISEINRLQMELSRQEDEETSDVDGFKRLIESLEKENTTLKLEKDELEAEVKLIWTSGKISPDASQIQKRIPSFNNHLPDRSKSFPRNEELERSLHKLSEELEETQKRNEELERSLLKLSKELEETQKERDKAVQQLTRLKQHLLEKESEDSEKMDEDSKIIEELRDGNNYLRAQISHLERTLKQGTASQEKLKMENDNEILKSREIIDDLNKKLTDCMSTIDAKNTELLNLQTALGQYYAEIEAKEHLEGDLARAKEENSKLSLLLKDAQCRADVLISEKEEILAKLSKSEKLQSEWRSRVSKLEEDNSRLRRAVEQSMTRLNRMSVDSDFLVDRRIVIKLLVTYFQRNHSKEVLDLMVRMLGFSNEDKQRIGVAQQGPGKGVVRGVLGLPGRLVGGILGGGGSTESAANAGADNQFPFQSFADLWVDFLLKETEEREKRESAGTRDKSMDDSHDRSYSNSSPPHSNQRFRTGTVPISSSTNQNISSLPRGYFQHSEQLGSEFSTVPLTSSSSDSSKLLPRY 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g00600 760 MobiDBLite consensus disorder prediction 741 760 - -
Vimu6g00600 760 MobiDBLite consensus disorder prediction 41 60 - -
Vimu6g00600 760 PANTHER MYOSIN HEAVY CHAIN - RELATED 129 723 - -
Vimu6g00600 760 Coils Coil 73 103 - -
Vimu6g00600 760 Coils Coil 399 419 - -
Vimu6g00600 760 Coils Coil 172 220 - -
Vimu6g00600 760 Coils Coil 532 559 - -
Vimu6g00600 760 MobiDBLite consensus disorder prediction 25 68 - -
Vimu6g00600 760 MobiDBLite consensus disorder prediction 675 731 - -
Vimu6g00600 760 MobiDBLite consensus disorder prediction 25 40 - -
Vimu6g00600 760 Coils Coil 483 524 - -
Vimu6g00600 760 Gene3D - 232 414 - -
Vimu6g00600 760 Coils Coil 228 255 - -
Vimu6g00600 760 Coils Coil 260 287 - -
Vimu6g00600 760 Coils Coil 325 387 - -
Vimu6g00600 760 MobiDBLite consensus disorder prediction 675 693 - -
Vimu6g00600 760 MobiDBLite consensus disorder prediction 694 731 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g00600 Vimu-Chr6 7224108 7237260 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g00600 - - gmx:100794376 1011.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu9g00208 9 2592182 2603791 Vimu6g00600 6 7224108 7237260 PCT