Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00203 ATGGCCCTTCTAATCCACTCCCCGGAAATTTCTGTTGCTCTCCAAATTGTTCCAAACCCTAACCCTAGGCTGAGCAAAGTCCACAGCTTCAAACCCCACACAAAGAGCACAAAGATTGGGTCAGCGCGCGGAGTGAGAATTGCTTGCAAATTGAAAGATTGTGCAGTTTTGGATTTGGGGTTAGATGAGAACGTGAATTCGTACGGTCAATTTTCGGTTCCTGTGAAACCAGAGTCGAAGCAGAGCAAAGAGAAAGAAGAAGAAGAGAAGCAGAATTATCATGTTAATGTGGGATATGCTATTAGAACTTTGAGGGAGGATTTCCCTGATCTCTTCTACAGGGAACTTAGCTTTGACATCTACAGGGATGATATTGTGTTTAAGGATCCAATGAACACGTTCCTTGGAATTGAGAATTACAAATCTATCTTCTGGGGACTACGATTCCATGGCAGGATATTTTTCAAAGCTTTGTGGGTTGACATAATTAGTGTATGGCAGCCTGTTGAGAACGTCATCATGGTTCGCTGGACTGTTCATGGTATCCCACGAGTTCTATGGGAAAGCCGTGGTAGGTTTGATGGAACCTCTGAGTATAAACTTGACAAGCAGGGCAAGATTTTTGAACACAGGGTTGACAACATTGCTACCAATTCACCTCCTCGGTTCAAAGTGTTTAGTGTAGCAGAGTTAATTCAATCTATTGGCTGCCCCTCAACTGCAAGACCTACCTATTTTGAAACATCTTCACATCCCGAGAGAACGTAA 768 0.4323 MALLIHSPEISVALQIVPNPNPRLSKVHSFKPHTKSTKIGSARGVRIACKLKDCAVLDLGLDENVNSYGQFSVPVKPESKQSKEKEEEEKQNYHVNVGYAIRTLREDFPDLFYRELSFDIYRDDIVFKDPMNTFLGIENYKSIFWGLRFHGRIFFKALWVDIISVWQPVENVIMVRWTVHGIPRVLWESRGRFDGTSEYKLDKQGKIFEHRVDNIATNSPPRFKVFSVAELIQSIGCPSTARPTYFETSSHPERT 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00203 255 Pfam Uncharacterized conserved protein (DUF2358) 100 210 IPR018790 -
Vimu9g00203 255 SUPERFAMILY NTF2-like 116 212 IPR032710 -
Vimu9g00203 255 PANTHER RIKEN CDNA 2310061I04 GENE 50 247 IPR018790 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00203 Vimu-Chr9 2569872 2572155 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00203 - - gmx:100792423 414.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu9g00203 9 2569872 2572155 Vimu9g00203 9 2569872 2572155 ECH
Vimu2g01596 2 11228292 11229287 Vimu9g00203 9 2569872 2572155 PCT