Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g01596 ATGTCCCTTCTCATCCATTGCTCGGAACCGTTCTTGGTCCCGAAAATAGTGCACTATCTTAACCCTAGACCCAGTAAGCTCTACAACTTCAAACCGGTAACAAAGGGCAAGACAATGGAGTTAAAAGTGAGTTGCAAAGTTAAAGATTATGGGTTTTTGGGTTTGGATCAGAATTTTAATTCGTACGGCTATTTTTCGGCTCCAGTGAAGAGAGGAAGCAAAGAGGAAGAAGAAAAAGAAAAGCAAAAGCAAGAATATTACGTGAATTTGGGGCATGCTCTTCGGGCTCTGAGAGAGGACTTCCCTGCCCTCTTCCACAGAGAACTGTCCTTCGATATCTATAGGGATGATATTGTACTCAAAGATCCTTTGAACACGTTTGTTGGCATCGAGAGTTACAAATCGATCTTCTGGGCTCTACGATTTCATGGCAGGATGTTTTTCAAGGCTTTGTGGATTGACTTATCCAGCGTGTGGCAGCCTGCAGAGAATGTCATTATGGTTCGGTGGACTGTTCATGGAATCTCACGAGGTCCATGGGAGAACCGTGGGAGGTTCGATGGAACCTCGGAGTATAAACTTGACAAGAATGGCAAGATTTTCCAACACCGTGTTGACAATGTTGCTACCAACACACGTCCTAAATTTAAACTGCTGCGTGTGGAAGACTTGCTTCAGTCTATATGCTGCCCCTCTACTCCAAGACCAACTTATTTTGAAACATCGTCGTCTACAGAGAGAACTTGA 747 0.4404 MSLLIHCSEPFLVPKIVHYLNPRPSKLYNFKPVTKGKTMELKVSCKVKDYGFLGLDQNFNSYGYFSAPVKRGSKEEEEKEKQKQEYYVNLGHALRALREDFPALFHRELSFDIYRDDIVLKDPLNTFVGIESYKSIFWALRFHGRMFFKALWIDLSSVWQPAENVIMVRWTVHGISRGPWENRGRFDGTSEYKLDKNGKIFQHRVDNVATNTRPKFKLLRVEDLLQSICCPSTPRPTYFETSSSTERT 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g01596 248 SUPERFAMILY NTF2-like 109 205 IPR032710 -
Vimu2g01596 248 Pfam Uncharacterized conserved protein (DUF2358) 93 203 IPR018790 -
Vimu2g01596 248 Gene3D - 108 209 - -
Vimu2g01596 248 PANTHER RIKEN CDNA 2310061I04 GENE 68 241 IPR018790 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g01596 Vimu-Chr2 11228292 11229287 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g01596 - - gmx:100792423 347.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu2g01596 2 11228292 11229287 Vimu9g00203 9 2569872 2572155 PCT