Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00140 ATGTTGGAGAAAGTAGAAGAGTTTAACATGGAGAGAGTGATAGAGGAATTTGAGAGGGTGACAAAGGATGCTGGGAGGATTCAAAAGGAAACACTGAAAAAGATTTTGGAAGATAACGCTTCTGCAGAGTACTTACTGAATTTGGGTCTGAATGGGAGGACTGACCCTGAGAGTTTCAAGGCCTTTGTTCCACTGGTCACTCACAAGGACTTGGAGCCTTATATCAACAGAATACTTGATGGGGATACTTCTTCTGTTCTCACTGCCAAACCAATCACAGCCATGTCTTTGAGTTCTGGCACTACTCAGGGAAAGCAAAAGTTTGTACCATGGAATGAGGAACTGTTTGACACCACATTGCAGATATATCACACCTCTTTTGCCTTCAGAAACAGGGAATTTCCCATGAACAATGGCAAAGCCTTGGGCTTTGTCTACAGCAGCAAGCAGTTCAAGACCGAAGGGGGTGTGCTAGCAGGAACTGCCACAACCAATGTGTTTCGCAGTCCAGGGTTCAGGACAGCGATGAAGGCCATTCATTCCCCATTTTGCAGCCCTGAAGAAGTTATATTTGGTCCTGATTTTCACCAATCACTGTACTGCCACCTCTTGTGTGGGCTAATATTCAGGGAGGAAGTTCAGATGGTGTCTTCCACCTTTGCACACAGCATTGTGAGTGCTTTTAGGACCTTTGAGCAAGTGTGGGAGGAGCTTTGTGTTGACATCAAAGAAGGGGTGCTGAACAGCAAGGTCACAGTCCCATCTGTTAGGACAGCAATGTCTAAGCTGCTGAAACCTGACCCTGAGCTGGCCAACTTGATCCACAATAAGTGCATGGGACTGAGCAACTGGTATGGCCTAATACCAGAGCTTTTCCCCAATGTTAAGTATGTTTTTGGCATCATGACTGGGTCAATGGAACCTTATTTGAAGAAGTTGAGGCATTATGCTGGAGAGTTGCCTTTGTTGACTTCTGACTATGGATCTTCTGAAGGGTGGATAGCAACCAATGTGAAACCAAGAGTGCCACCTGAATTGGCCACATACACTGTTCTTCCTCAAATTGGCTATTTTGAATTCATCCCTCTGAGAGAGCTGGCAGAAACTAATGGAGATGGCAGTTTCCTTTGTATGGATCCTAAGCCTGTGGGGCTCACTGATGTGAAAGTTGGCGAGGAGTACGAGATAGTCATCACCAATCCAGCAGGCTTGTACAGGTACCGACTTGGAGATGTGGTGAAGGTTATGGGGTTCCATAACTCATCTCCAGAAGTGAAGTTTGTTAGGCGCAGCAATCTTCTGCTTAACATCAACATTGACAAGAACACAGAGGAAGATTTGCAGATAGCTGTGGAAGCAGCATCACAGTTGTTGGCAGAGGAGAAATTAGAAGTTATAGATTACACAAGCCACATAGATTTGTCCAAAGAGCCAGGCCATTATGTGATATTCTGGGAAATCAGTGGAGAAGCAAGTGAAGAAGTGCTTGGTGGATGCTGCAACTGCATGGACAAGGCTTTTGTTGATGCTGGCTACACCAGTTCTCGCAAAGTCAACTGCATTGCTGCCCTTGAACTCCGACTTGTGAGGAGAGGAACATTCCAGAAGATTCTTGAGCATTACGTGGAACTTGGATCTGCTGCAAATCAGTTCAAGACACCAAGATACGTAGGCCTTACAAACACCAGAGTGTTGCAAATATTGAATGAAAATGTTGTCAAGAACTATCTCAGTACTGCCTTCAACTGA 1749 0.4517 MLEKVEEFNMERVIEEFERVTKDAGRIQKETLKKILEDNASAEYLLNLGLNGRTDPESFKAFVPLVTHKDLEPYINRILDGDTSSVLTAKPITAMSLSSGTTQGKQKFVPWNEELFDTTLQIYHTSFAFRNREFPMNNGKALGFVYSSKQFKTEGGVLAGTATTNVFRSPGFRTAMKAIHSPFCSPEEVIFGPDFHQSLYCHLLCGLIFREEVQMVSSTFAHSIVSAFRTFEQVWEELCVDIKEGVLNSKVTVPSVRTAMSKLLKPDPELANLIHNKCMGLSNWYGLIPELFPNVKYVFGIMTGSMEPYLKKLRHYAGELPLLTSDYGSSEGWIATNVKPRVPPELATYTVLPQIGYFEFIPLRELAETNGDGSFLCMDPKPVGLTDVKVGEEYEIVITNPAGLYRYRLGDVVKVMGFHNSSPEVKFVRRSNLLLNINIDKNTEEDLQIAVEAASQLLAEEKLEVIDYTSHIDLSKEPGHYVIFWEISGEASEEVLGGCCNCMDKAFVDAGYTSSRKVNCIAALELRLVRRGTFQKILEHYVELGSAANQFKTPRYVGLTNTRVLQILNENVVKNYLSTAFN 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00140 582 Pfam GH3 auxin-responsive promoter 16 557 IPR004993 -
Vimu9g00140 582 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 7 581 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00140 Vimu-Chr9 1662476 1665457 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g00140 17 579 EF-hand Containing Proteins AT1G23160 38.408 3.72e-134 401
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00140 K14506 - gmx:100813492 1072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu9g00140 9 1662476 1665457 Vimu9g00140 9 1662476 1665457 ECH
Vimu2g01576 2 11065203 11068749 Vimu9g00140 9 1662476 1665457 PCT