Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00137 ATGGTGAAGAGAGTGAGGTCTGATTCGGGACCACTGTCCCTGCAAAAGCACAACCATGTGTGTGTCAAGTTAGCACTCTCAATTTTCTTGGTGGGTCTCGCTGTTCGTCTTCTCTTGTGGGATTCATTCAGTTTCTTATCAGTGGTGGAGTCGCCTCCTGTGGAAGATGCAAAAGCAGAGTCCCCTGTTTTACCTTCCTCTGATCTTCAGGCTTCTGATTCTGATGACTTTCCGGAAACTCGTCAGAATCAGACTCAAATCTCTAAGGATGCTTGTAATGCCAATGGTAATGGGCATTGTAAATGTGTAGCTGCAGAAAAATGTGATCTTTTTGTGGGAGAATGGGTACCAGACCAATCTGGGCCTGTGTACACTAATGAAAGCTGCCGGGTGATTGAGCCTCATCAAAATTGTATGAAGAATGGACGTCCTGATTCAGGGTACCTGTACTGGAGGTGGAGTCCAAGAGACTGTAAATTGCCCAAGTTCAATCCCAAGAAGTTTCTTAAGTTTATGAGAAATAAATCATTGGCTTTCATTGGTGATTCAATCTCTCGTAATCAAGTTCAGTCCCTACTTTGTATTCTCTCAAAGGTGGAACCTGCTGTTGAAATTTACCATGACAAGGAATACAGATCAAAGATATGGAAATTTCGCTCTCATAACTTCACACTCTCAGTAATCTGGACCCCTTTCCTTGTTAAAGCAGCTATATTTGAGGATATGAATGGAGTTACCTCATCAGAGATACAACTTTATGTTGACACTCTAGATAAGTGGACCAACCAATATAAGAACTTTGACTATGTTGTCATTGGTGGTGGAAAATGGTTTCTCAAGACTGCAATATACCATGAAAACAACACAGTAACCGGTTGCCACTACTGCCCTGGAAAGAACTTAACAGAGCTGGGATTTGACTATGCTTACCGCAAAGTACTACAAGAAGTTTTCAAGTTCTTCACAAACTCTAAACACAAGGCCACTGTTCTCTTCAGAACCACCACACCTGACCACTTTGAGAATGGGGAGTGGTTTAGTGGAGGGTACTGCAATAGAACTGTACCCTTCAAGGAGGGTCAGATTCATATGATAGATGTGGATTCCATAATGAGAGGTATTGAACTTGAAGAGTTTGAGAAGGCTGCTTCCCTAGGATCTCAAAGGGTGAACTTGCAACTTTTGGACACAACACTCCTTTCATTGCTGAGACCAGATGGGCATCCAGGACCTTACAGGAAGTTCCAGCCATTTGCAAAAGACAAGAATGCTAAAGTTCAAAACGATTGTCTACATTGGTGTTTGCCCGGACCAATTGACTCATGGAATGACATCATAATGCAAATGCTACTCAATGCCTAA 1362 0.4244 MVKRVRSDSGPLSLQKHNHVCVKLALSIFLVGLAVRLLLWDSFSFLSVVESPPVEDAKAESPVLPSSDLQASDSDDFPETRQNQTQISKDACNANGNGHCKCVAAEKCDLFVGEWVPDQSGPVYTNESCRVIEPHQNCMKNGRPDSGYLYWRWSPRDCKLPKFNPKKFLKFMRNKSLAFIGDSISRNQVQSLLCILSKVEPAVEIYHDKEYRSKIWKFRSHNFTLSVIWTPFLVKAAIFEDMNGVTSSEIQLYVDTLDKWTNQYKNFDYVVIGGGKWFLKTAIYHENNTVTGCHYCPGKNLTELGFDYAYRKVLQEVFKFFTNSKHKATVLFRTTTPDHFENGEWFSGGYCNRTVPFKEGQIHMIDVDSIMRGIELEEFEKAASLGSQRVNLQLLDTTLLSLLRPDGHPGPYRKFQPFAKDKNAKVQNDCLHWCLPGPIDSWNDIIMQMLLNA 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00137 453 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 160 449 IPR026057 GO:0016740
Vimu9g00137 453 Pfam PMR5 N terminal Domain 106 159 IPR025846 -
Vimu9g00137 453 MobiDBLite consensus disorder prediction 65 85 - -
Vimu9g00137 453 MobiDBLite consensus disorder prediction 57 85 - -
Vimu9g00137 453 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 50 446 IPR029962 GO:0016413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00137 Vimu-Chr9 1596040 1599166 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00137 - - gmx:100305942 816.609
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu9g00137 9 1596040 1599166 Vimu9g00137 9 1596040 1599166 ECH
Vimu2g01573 2 11044014 11046770 Vimu9g00137 9 1596040 1599166 PCT