Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g01573 ATGAAGAAGGAAACAAGGTCTGATTCGAACCCATTGTTCGCGCAGAAGCACAACTATCATCGTTTCTTCCTTAAGTTGGCACTGTCGTGTCTCTTGGTGGGTCTCACTGTTCGCCTCCTCTTCACCGATTCCTTCAGTTTGTCATCTGTTGTGCACAATCCTCCCCCTCTTGCAAATGCAATACCAAACTCACCCTTTCTATCTTTTCCGCCTCCGCCGTCTTATTCTGCTGATTTTCCGGTAAACCAGACCCAAACCTCTCCCCAAGATGCAGTGGAGTGCGATCTTTTTGTGGGAGATTGGGTGCCGGACCTAAATGGTCCAAGGTACACCAATGAGAGCTGCCGTGTGATTCAAGATCATCAGAACTGCATGAAGAATGGACGGCCTGATTCGGGGTATCTTTATTGGAGGTGGAACCCAAGGGGTTGTGAATTACCCAAGTTCAGTCCAAGGAAATTCCTTGACATGATGAGGGATAAATCATTGGCCTTTATTGGTGATTCCATCTCTCGGAACCATGTGCAATCTCTACTGTGCCTTCTCTCACAGGTGGAAGAAGCTGATGCGGTGTACCATGATGAGGAATATAAATCAAGGATATGGAAGTTCCCCTCCCACAACTTCACCCTCTCAGTACTATGGAGCCCATTCCTTGTCAAAGCAGATATTTTCGAGGACATCAATGGAGTTTCCTCTTCAGAACCACAGCTCTATCTTGACGTTGTGGACGACAAGTGGACCAGCCAATACAAGAATTTTGACTATGTTGTAATCGCAGGTGGCAAATGGTTCCTCAAGACAGCAATATACCATGAAAACAACACTGTAACAGGCTGCTACAAATGCCATGGAAAGAATTTAACAGATCAAGGGTTTCAACATGCATACAGCAAAGCATTGCAGCAGGCTTTTGATTTCATGACAGATTCAGAGCACAAACCGGTTGTGTTCTTCAGAACCACCACACCAGACCACTTTGAGTATGGGGAGTGGTTCAATGGAGGGTACTGCAATAGGACACTGCCCTTCAAAGAGGAACGGATAAATATGAGGTATGAGGATTCCATCTTGAGAAGCATTGAACTTGAAGAGTTTGACAGGGCCAAGAATGCAAGTCCCAACTTCAAACTTTTGGACACCACTGGGCTTTCACTGTTGAGGCCCGATGGGCATCCAGGCCCGTACCGTTACTTTCATCCTTTGCTCAATTCTACGGTCCAGAATGATTGCCTGCATTGGTGTCTCCCAGGCCCAATTGATTCCTGGAACGACATACTTTTGCAAATGCTCATAATCTGA 1302 0.4616 MKKETRSDSNPLFAQKHNYHRFFLKLALSCLLVGLTVRLLFTDSFSLSSVVHNPPPLANAIPNSPFLSFPPPPSYSADFPVNQTQTSPQDAVECDLFVGDWVPDLNGPRYTNESCRVIQDHQNCMKNGRPDSGYLYWRWNPRGCELPKFSPRKFLDMMRDKSLAFIGDSISRNHVQSLLCLLSQVEEADAVYHDEEYKSRIWKFPSHNFTLSVLWSPFLVKADIFEDINGVSSSEPQLYLDVVDDKWTSQYKNFDYVVIAGGKWFLKTAIYHENNTVTGCYKCHGKNLTDQGFQHAYSKALQQAFDFMTDSEHKPVVFFRTTTPDHFEYGEWFNGGYCNRTLPFKEERINMRYEDSILRSIELEEFDRAKNASPNFKLLDTTGLSLLRPDGHPGPYRYFHPLLNSTVQNDCLHWCLPGPIDSWNDILLQMLII 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g01573 433 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 49 428 IPR029962 GO:0016413
Vimu2g01573 433 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 146 430 IPR026057 GO:0016740
Vimu2g01573 433 Pfam PMR5 N terminal Domain 93 145 IPR025846 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g01573 Vimu-Chr2 11044014 11046770 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g01573 - - gmx:100795653 746.888
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu2g01573 2 11044014 11046770 Vimu9g00137 9 1596040 1599166 PCT