Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00125 ATGATGAACGGTGACTCTCGCAGTGCTCTTGAGGCACAGTACATAAGGAGACATCACAAACATGAACCAAGGGAAAACCAGTGCACTTCTGCTCTTGTTAAACACATCAAAGCCCCTGTTCACCTTGTTAGTTTGCCTTTTCTACCTTACCTTGTTGGACCGATTGTGTTTTGCAGTGACTCCACAAATCTTGACACTGCAGTTTTGACTGCTGCAATTGTGTGGTCGCTGGTTAGAAGATTTGATCAACCCCAGAAATATAAACCATTTGTTAGCAGATGCATCATGCAAGGAGACCTTGGCATTGGAAGTGTTAGAGAAGTGAATGTTAAATCTGGCCTTCCAGCCACAACAAGTACTGAGAGGTTGGAACAACTTGATGATGAGGAGCACATTCTTGGCATCAGGATTGTTGGAGGCGACCATAGGCTGAGGAACTATTCTTCCATAATAACAGTGCATCCAGAGGTGATTGAGGGAAGACCTGGAACAATGGTGATTGAATCATTTGTGGTGGATGTGCCTGATGGAAACACTAAGGATGAAACTTGCTACTTTGTGGAGGCTTTGATCAGGTGTAACCTAAGCTCTCTTGCTGATGTCTCAGAGAGGATGGCAGTTCAAGGCCGAACCGATCCCATCAACCATTAA 651 0.447 MMNGDSRSALEAQYIRRHHKHEPRENQCTSALVKHIKAPVHLVSLPFLPYLVGPIVFCSDSTNLDTAVLTAAIVWSLVRRFDQPQKYKPFVSRCIMQGDLGIGSVREVNVKSGLPATTSTERLEQLDDEEHILGIRIVGGDHRLRNYSSIITVHPEVIEGRPGTMVIESFVVDVPDGNTKDETCYFVEALIRCNLSSLADVSERMAVQGRTDPINH 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00125 216 Pfam Polyketide cyclase / dehydrase and lipid transport 69 203 IPR019587 -
Vimu9g00125 216 CDD PYR_PYL_RCAR_like 70 203 - -
Vimu9g00125 216 Gene3D - 60 212 IPR023393 -
Vimu9g00125 216 Gene3D - 2 45 IPR023393 -
Vimu9g00125 216 PANTHER - 69 200 - -
Vimu9g00125 216 SUPERFAMILY Bet v1-like 70 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00125 Vimu-Chr9 1482815 1485731 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00125 K14496 - gmx:100500065 342.428
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu9g00125 9 1482815 1485731 Vimu1g02844 1 40740864 40741902 ECH
Vimu9g00125 9 1482815 1485731 Vimu9g00125 9 1482815 1485731 ECH