Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00124 ATGTCTTATTCTGCAGTTTCTGTTCCAACCTCTATATCTTCCTCTGCAACAATGGACATCACAACAGAGAATAAAGTGCTTCTCCACTCACTCTTCTCCAACAAAGGCTTATGCAACCATTCATCAATCACGAGGTCTCACTCTGGCAATCTTCTATGTTGCTCCTCTAACAACTTCAGAGCAACATCAATGCAACCAAAGCATAAAAGCATGCACTCCATAGTAGTTTTTCCACTTCAACTTTCAGTGTCCATTCTTCCAAATCAACTTCGCTCCTTCTTCTTTGACCCAGAAAAAAAGAGGGAAATGAAGATGGGGCAGAAGGGTATCAATTTTAAGGAAAACACGGTGGAAAGCACCGAAGAAGAGACCATAAATAGAGCCAACTGGGTAGAAAAATTAAGGGGAATTAAGACTTATTGGAGAGGGAAACGGCCTAAAGAGAGCATGGATTCAGATATGGTATCTAAACACGATAATGAGTGTGATTGTGATGCAGAGGATAGTGTTTGTGTGGCAGGTTATGAAGAAGGAAATGGAAAAGAGGAAGATGGACAAGAAGTGACATTTGATCGAGACTCTTTCTCAAAATTTCTGGTCCCGGTTCCTTGGTCTGATACCAAACTATTCTCGAAGATGGCTTTCCTGTGCCACATGGCTTATGTCATACCACAAATCAAGGCTAAGGACTTGGGGAGATACTATGGTCTTCAATTCGTTACATCATCTTTGAAAAAGAAAAAGAAAAAGAAAGGAGATGTGACAGAGATTAAAGCAAAACGTGATCAGGACTCTATTTGTGTGCCTATGGATGCCTCAGTAGCCTCTCAAAATGGCTCAGAGAAAGGTAATGATAATGAACAGAAGCATCAAATGAAGCTTGCGTATGATATTACTGCTTCAGCTGCCTCTTATGTCCAATCACGTGCCAAGGACATTTTGTCTCTTGCTTCTAAGTCAAAGCAGCATAGTGGTGATGAAGACTTCAGTGGAAGAGAAGACTCACCTCAAGAGGAGGCTGATGAAACTCCAGAGGTGGACAAGTCCAAGTCTGGAGTTAATGTTGCAGAATTAACAATGACTGTGGTGGCTGCAGCAGGATCAGCAATGGACCTTCAGTTACTTCGTTCTTCGTCTTGTGAATGGTTTGTTTGTGATGATCCCAACACGCACACTCGATGCTTTGCCATTCAGGGATCATATTCTGTGGCATCTTGGCAAGCAAACCTCTCATTTGAGCCTACCACATTTGAGGACACAGATGTTCTTGTTCACAGTGGAATATATGAAGCAGCCAAGGGAATATATGAGCAATTCATGCCAGAAATAATGGACCATTTGCAGAGACATGGAGACAGTGCAAAGATTCAATTTGCTGGACATTCCCTAGGGGGCAGTCTCTCAGTTTTGGTGTCTTTGATGCTATTGACTAGGAAGGTTGTCAGTTCCTCAACTCTTCTTCCAATAGTGACTTTTGGTTCTCCATTTGTGTTATGTGGAGGCCAAAAACTACTCAATGACCTTGGCCTTGATGATAGCTTCATTCACTGTGTAATGATGCACAGAGATATTGTTCCTAGGATCTTCTCATGCAGTTTCCCTAACCATCTTATAACTGTCCTTAAGCGCTTAAAAGGCTCATTGGATTCACATCCTTGTCTCATAGAAAAGAAGCTATTGTACTCACCATTGGGTAAGATGTTGATTCTTCAACCAGATGAGAAAACATCTCCTTCACATCCCTTACTGCCATCAGGAAGTGGTTTCTATGTTCTTGACAGTAGCAGATGTGGATACTCTTCAATTGTTCTAAGAGCATTCCTCAATCAACCACACCCCATTGAAACACTAAGCAATCCAAAAGCTTATGGCTCAGATGGCACAGTTTTAAGAGACCATGATTGTAACAACTATCTTATGGCAGTGAATGGAGTTTTAGCAAAAAATTCAAAGATTGTTGTCAGGACAAGGAGATCAAGGCAGCAACGAAAAATATTGAAGAGAAAGATGAGAAAATAA 2019 0.4126 MSYSAVSVPTSISSSATMDITTENKVLLHSLFSNKGLCNHSSITRSHSGNLLCCSSNNFRATSMQPKHKSMHSIVVFPLQLSVSILPNQLRSFFFDPEKKREMKMGQKGINFKENTVESTEEETINRANWVEKLRGIKTYWRGKRPKESMDSDMVSKHDNECDCDAEDSVCVAGYEEGNGKEEDGQEVTFDRDSFSKFLVPVPWSDTKLFSKMAFLCHMAYVIPQIKAKDLGRYYGLQFVTSSLKKKKKKKGDVTEIKAKRDQDSICVPMDASVASQNGSEKGNDNEQKHQMKLAYDITASAASYVQSRAKDILSLASKSKQHSGDEDFSGREDSPQEEADETPEVDKSKSGVNVAELTMTVVAAAGSAMDLQLLRSSSCEWFVCDDPNTHTRCFAIQGSYSVASWQANLSFEPTTFEDTDVLVHSGIYEAAKGIYEQFMPEIMDHLQRHGDSAKIQFAGHSLGGSLSVLVSLMLLTRKVVSSSTLLPIVTFGSPFVLCGGQKLLNDLGLDDSFIHCVMMHRDIVPRIFSCSFPNHLITVLKRLKGSLDSHPCLIEKKLLYSPLGKMLILQPDEKTSPSHPLLPSGSGFYVLDSSRCGYSSIVLRAFLNQPHPIETLSNPKAYGSDGTVLRDHDCNNYLMAVNGVLAKNSKIVVRTRRSRQQRKILKRKMRK 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00124 672 Gene3D alpha/beta hydrolase 342 557 IPR029058 -
Vimu9g00124 672 SUPERFAMILY alpha/beta-Hydrolases 378 567 IPR029058 -
Vimu9g00124 672 CDD Lipase_3 345 538 - -
Vimu9g00124 672 PANTHER PHOSPHOLIPASE A1 PLIP2, CHLOROPLASTIC 19 666 IPR043367 GO:0008970
Vimu9g00124 672 MobiDBLite consensus disorder prediction 317 351 - -
Vimu9g00124 672 Pfam Lipase (class 3) 395 531 IPR002921 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00124 Vimu-Chr9 1450288 1453793 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g00124 11 664 Acyl Lipid Metabolism Gene Families AT3G61680 47.455 0.0 563
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00124 - - vra:106773723 1279.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu9g00124 9 1450288 1453793 Vimu9g00124 9 1450288 1453793 ECH
Vimu2g01553 2 10816640 10820157 Vimu9g00124 9 1450288 1453793 PCT