Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g01553 ATGCCAGCAATAATGGATCATTTGAAGAGACACGGGGATCGTGCAAAGCTTCAATTCACCGGGCACTCCCTCGGGGGCAGTCTCTCTCTTTTGGTTCATCTGATGCTGTTGACAAACAAGGTTGTGAGTCCCTCCACTCTTCGACCAGTTGTGACTTTTGGCTCACCATTTGTATTCTGTGGAGGCCATCAAATTATCCATGAGCTAGGCCTAGACGAGAGCCACATCCACTGTGTGATGATGCATAGAGATATTGTTCCCAGGGCTTTCTCCTGCAATTACCCAAATCATGTAACTGTAGTTCTTAAGCGCTTGAACAGCTCCTTTCGCTCACATCCTTGTCTGCTGAAAAACAAGCTGTTGTATTCACCGCTGGGTAAAATATTCATTCTCCAACCCGATGAGAAGACGTCTCCTCCACATCCTTTGCTCCCTCGAGGAAGTGCCTTCTATGCCCTGGACAATACTAAACCTGGATACTCTCCGAGTGTTCTTAGAACTTTCCTGAATCAACCACACCCTATTGACACTCTGAGTGATCCAACAGCGTATGGTTCAGAAGGTACAATTTTGAGAGACCACGATTCCAGTAACTACCTTAAAGCCGTCAATGGAGTCCTGAGGGAACATTCTAAGATTCTCCTTCGCAGAGTGAGGAGCCAAAGGATTAATCAGTTGTGGCCACTTTTGACATCGCCGTCTCCACACTCATGGAGTCATGAACAGAATTTGGAGAGATGCAGCTTGATGACAAAGGAGATAGTGACAGGGGTTTGA 777 0.4659 MPAIMDHLKRHGDRAKLQFTGHSLGGSLSLLVHLMLLTNKVVSPSTLRPVVTFGSPFVFCGGHQIIHELGLDESHIHCVMMHRDIVPRAFSCNYPNHVTVVLKRLNSSFRSHPCLLKNKLLYSPLGKIFILQPDEKTSPPHPLLPRGSAFYALDNTKPGYSPSVLRTFLNQPHPIDTLSDPTAYGSEGTILRDHDSSNYLKAVNGVLREHSKILLRRVRSQRINQLWPLLTSPSPHSWSHEQNLERCSLMTKEIVTGV 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g01553 258 Pfam Lipase (class 3) 6 93 IPR002921 GO:0006629
Vimu2g01553 258 Gene3D alpha/beta hydrolase 1 244 IPR029058 -
Vimu2g01553 258 SUPERFAMILY alpha/beta-Hydrolases 4 117 IPR029058 -
Vimu2g01553 258 SUPERFAMILY alpha/beta-Hydrolases 3 242 IPR029058 -
Vimu2g01553 258 PANTHER PHOSPHOLIPASE A1 PLIP2, CHLOROPLASTIC 1 246 IPR043367 GO:0008970
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g01553 Vimu-Chr2 10816640 10820157 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g01553 1 232 Acyl Lipid Metabolism Gene Families AT3G61680 68.966 1.17e-121 359
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g01553 - - gmx:100790575 490.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu2g01553 2 10816640 10820157 Vimu9g00124 9 1450288 1453793 PCT